RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 SPANXA1Q9NS26 97 aa5.48□□□□□ -1.53
TMEM254-208ENST00000463209 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 A0A087WYN8 130 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 A0A0J9YXV3 536 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 ZNF561-AS1K7EIQ3 104 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 RPL37AP61513 92 aaKnown RBP5.47□□□□□ -1.53
TMEM254-208ENST00000463209 MAJINQ3KP22 176 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 C10orf91Q5T1B1 145 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 C2orf66Q6UXQ4 117 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 Q6ZRU5 148 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 CARD19Q96LW7 228 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 CARHSP1Q9Y2V2 147 aaKnown RBP5.47□□□□□ -1.53
TMEM254-208ENST00000463209 VPS13BQ7Z7G8 4022 aa5.47□□□□□ -1.53
TMEM254-208ENST00000463209 MYCBP2O75592 4640 aa5.46□□□□□ -1.53
TMEM254-208ENST00000463209 TGIF2-C20orf24A0A0A6YYL0 155 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 PRSS47A8MTI9 375 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 S100PP25815 95 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 MRPS36P82909 103 aaKnown RBP5.46□□□□□ -1.54
TMEM254-208ENST00000463209 SPAG11BQ08648 103 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 SYCNQ0VAF6 134 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 SMAGPQ0VAQ4 97 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 CIRBPQ14011 172 aaKnown RBP5.46□□□□□ -1.54
TMEM254-208ENST00000463209 LAMTOR2Q9Y2Q5 125 aa5.46□□□□□ -1.54
TMEM254-208ENST00000463209 APOC3P02656 99 aa5.45□□□□□ -1.54
TMEM254-208ENST00000463209 LINC00173Q6ZV60 143 aa5.45□□□□□ -1.54
TMEM254-208ENST00000463209 ORAOV1Q8WV07 137 aa5.45□□□□□ -1.54
TMEM254-208ENST00000463209 CAMK2N2Q96S95 79 aa5.45□□□□□ -1.54
TMEM254-208ENST00000463209 CYSLTR1Q9Y271 337 aa5.45□□□□□ -1.54
TMEM254-208ENST00000463209 RHEBQ15382 184 aa5.44□□□□□ -1.54
TMEM254-208ENST00000463209 ORMDL2Q53FV1 153 aa5.44□□□□□ -1.54
TMEM254-208ENST00000463209 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
TMEM254-208ENST00000463209 STPG4Q8N801 248 aa5.44□□□□□ -1.54
TMEM254-208ENST00000463209 TMEM141Q96I45 108 aa5.44□□□□□ -1.54
TMEM254-208ENST00000463209 ALKBH7Q9BT30 221 aaPredicted RBP5.44□□□□□ -1.54
TMEM254-208ENST00000463209 TRAV9-1A0A075B6T8 112 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 IGHV3OR16-9A0A0B4J2B5 98 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 IGIPA6NJ69 53 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 UBE2D1P51668 147 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 FABP9Q0Z7S8 132 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 GAGE2BQ13066 116 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 C10orf25Q5T742 122 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 TEX43Q6ZNM6 134 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 GNB1LQ9BYB4 327 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 NXT2Q9NPJ8 142 aaKnown RBP5.43□□□□□ -1.54
TMEM254-208ENST00000463209 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
TMEM254-208ENST00000463209 HERC1Q15751 4861 aa5.42□□□□□ -1.54
TMEM254-208ENST00000463209 DMBT1Q9UGM3 2413 aaPredicted RBP5.42□□□□□ -1.54
TMEM254-208ENST00000463209 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.42□□□□□ -1.54
TMEM254-208ENST00000463209 APOMO95445 188 aa5.42□□□□□ -1.54
TMEM254-208ENST00000463209 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
TMEM254-208ENST00000463209 C2orf82Q6UX34 121 aa5.42□□□□□ -1.54
TMEM254-208ENST00000463209 C2orf88Q9BSF0 95 aa5.42□□□□□ -1.54
TMEM254-208ENST00000463209 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 UNQ6190/PRO20217Q6UXQ8 127 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 Q6ZN92 141 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 OR10D4PQ8NGN7 298 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 AMELXQ99217 191 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 VCX2Q9H322 139 aa5.41□□□□□ -1.54
TMEM254-208ENST00000463209 A0A087WZ39 114 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 LOC107984640A0A0U1RRK4 108 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 FAM168BA1KXE4 195 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 PMCHL1Q16048 86 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 FA2HQ7L5A8 372 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 URB1-AS1Q96HZ7 61 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 SCGB3A1Q96QR1 104 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 C6orf48Q9UBA6 75 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 TRAPPC1Q9Y5R8 145 aa5.4□□□□□ -1.54
TMEM254-208ENST00000463209 SNAPINO95295 136 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 MT-ND6P03923 174 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 KIAA0087Q14695 138 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 C9orf116Q5BN46 136 aaPredicted RBP5.39□□□□□ -1.55
TMEM254-208ENST00000463209 CBLN2Q8IUK8 224 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 SLC7A5P1Q8MH63 180 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 SVBPQ8N300 66 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
TMEM254-208ENST00000463209 LINC01546A6NGU7 62 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 K7EMI3 77 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 NDUFA1O15239 70 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 PRR3P79522 188 aaKnown RBP5.38□□□□□ -1.55
TMEM254-208ENST00000463209 NDUFA5Q16718 116 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 Q6ZRP5 223 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 YPEL4Q96NS1 127 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 TIMM17AQ99595 171 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 SMCO4Q9NRQ5 59 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
TMEM254-208ENST00000463209 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
TMEM254-208ENST00000463209 A0A096LNJ9 63 aa5.37□□□□□ -1.55
TMEM254-208ENST00000463209 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
TMEM254-208ENST00000463209 COX19Q49B96 90 aa5.37□□□□□ -1.55
TMEM254-208ENST00000463209 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
TMEM254-208ENST00000463209 ERASQ7Z444 233 aa5.37□□□□□ -1.55
TMEM254-208ENST00000463209 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms