RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 H0Y8G0 127 aa5.05□□□□□ -1.6
UBE4B-204ENST00000462658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.05□□□□□ -1.6
UBE4B-204ENST00000462658 RPL39P62891 51 aaKnown RBP5.05□□□□□ -1.6
UBE4B-204ENST00000462658 ERASQ7Z444 233 aa5.05□□□□□ -1.6
UBE4B-204ENST00000462658 C20orf203Q8NBC4 194 aa5.05□□□□□ -1.6
UBE4B-204ENST00000462658 C11orf45Q8TAV5 145 aa5.05□□□□□ -1.6
UBE4B-204ENST00000462658 B9D2Q9BPU9 175 aa5.05□□□□□ -1.6
UBE4B-204ENST00000462658 CHCHD7Q9BUK0 85 aa5.05□□□□□ -1.6
UBE4B-204ENST00000462658 VPS13DQ5THJ4 4388 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 TRAV26-1A0A087WT03 109 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 C20orf202A1L168 122 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 LINC00694P0DN24 101 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 Q6ZN92 141 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 NTM-AS1Q6ZSK4 140 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 SPATA12Q7Z6I5 190 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 Q8N976 141 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 TMEM141Q96I45 108 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 VSIG2Q96IQ7 327 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 C2orf48Q96LS8 159 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 GTSF1LQ9H1H1 148 aa5.04□□□□□ -1.6
UBE4B-204ENST00000462658 DNAH10Q8IVF4 4471 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.03□□□□□ -1.6
UBE4B-204ENST00000462658 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 IGKV2-29A2NJV5 120 aaPredicted RBP5.03□□□□□ -1.6
UBE4B-204ENST00000462658 IGIPA6NJ69 53 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 H7C423 109 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 TMEM97Q5BJF2 176 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 FAM218AQ96MZ4 157 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
UBE4B-204ENST00000462658 STAB2Q8WWQ8 2551 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 TRBV25-1A0A075B6N4 114 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 A0A096LPF7 62 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 TRBV6-8A0A0A6YYG3 113 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 MRPL23Q16540 153 aaKnown RBP5.02□□□□□ -1.61
UBE4B-204ENST00000462658 LCE1FQ5T754 118 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 LGALS9CQ6DKI2 356 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 TEX43Q6ZNM6 134 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 BAALCQ8WXS3 180 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 PMCHL2Q9BQD1 86 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 C2orf88Q9BSF0 95 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 TMEM243Q9BU79 118 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 ICOSQ9Y6W8 199 aa5.02□□□□□ -1.61
UBE4B-204ENST00000462658 A0A087WX48 190 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 H3BNG1 76 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 UBE2L6O14933 153 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 CEMP1Q6PRD7 247 aaPredicted RBP5.01□□□□□ -1.61
UBE4B-204ENST00000462658 SH2D6Q7Z4S9 175 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 TIMM21Q9BVV7 248 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 SPANXA1Q9NS26 97 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 UBE2D4Q9Y2X8 147 aa5.01□□□□□ -1.61
UBE4B-204ENST00000462658 IGLV4-3A0A075B6K6 122 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 TRAV10A0A0B4J240 114 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 FGF6P10767 208 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 SMAGPQ0VAQ4 97 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 PMVKQ15126 192 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 MRPL52Q86TS9 123 aaKnown RBP5□□□□□ -1.61
UBE4B-204ENST00000462658 CHCHD5Q9BSY4 110 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 VCX2Q9H322 139 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 CST9LQ9H4G1 147 aa5□□□□□ -1.61
UBE4B-204ENST00000462658 MRPL35Q9NZE8 188 aaKnown RBP5□□□□□ -1.61
UBE4B-204ENST00000462658 CHTOPQ9Y3Y2 248 aaKnown RBP5□□□□□ -1.61
UBE4B-204ENST00000462658 KMT2AQ03164 3969 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 TRAV9-2A0A087WT02 112 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 F8VRH5 84 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 DPM2O94777 84 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
UBE4B-204ENST00000462658 MRPS36P82909 103 aaKnown RBP4.99□□□□□ -1.61
UBE4B-204ENST00000462658 AMMECR1LQ6DCA0 310 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 FAM104AQ969W3 186 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 TMEM101Q96IK0 257 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 VAMP8Q9BV40 100 aa4.99□□□□□ -1.61
UBE4B-204ENST00000462658 CSDC2Q9Y534 153 aaKnown RBP4.99□□□□□ -1.61
UBE4B-204ENST00000462658 HSBP1L1C9JCN9 74 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 TMEM262E9PQX1 116 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 IGKCP01834 107 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 PLNP26678 52 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 MAJINQ3KP22 176 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 RNASE13Q5GAN3 156 aaKnown RBP4.98□□□□□ -1.61
UBE4B-204ENST00000462658 LYPD5Q6UWN5 251 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 Q6ZUT4 128 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 ZNF664Q8N3J9 261 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 OR5A1Q8NGJ0 315 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 AMELXQ99217 191 aa4.98□□□□□ -1.61
UBE4B-204ENST00000462658 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
UBE4B-204ENST00000462658 ZNF25P17030 456 aaPredicted RBP4.97□□□□□ -1.61
UBE4B-204ENST00000462658 SPATA45Q537H7 98 aa4.97□□□□□ -1.61
UBE4B-204ENST00000462658 LELP1Q5T871 98 aa4.97□□□□□ -1.61
UBE4B-204ENST00000462658 CDC42SE2Q9NRR3 84 aa4.97□□□□□ -1.61
UBE4B-204ENST00000462658 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.62
UBE4B-204ENST00000462658 DNAH17Q9UFH2 4485 aa4.96□□□□□ -1.62
UBE4B-204ENST00000462658 IGLV4-69A0A075B6H9 119 aa4.96□□□□□ -1.62
UBE4B-204ENST00000462658 IGLV4-60A0A075B6I1 120 aa4.96□□□□□ -1.62
UBE4B-204ENST00000462658 PKIAP61925 76 aa4.96□□□□□ -1.62
UBE4B-204ENST00000462658 SRSF9Q13242 221 aaKnown RBP eCLIP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms