RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CCL25O15444 150 aa5.05□□□□□ -1.6
CDC42BPA-210ENST00000462553 CNBPP62633 177 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-210ENST00000462553 C9orf163Q8N9P6 203 aa5.05□□□□□ -1.6
CDC42BPA-210ENST00000462553 TMEM101Q96IK0 257 aa5.05□□□□□ -1.6
CDC42BPA-210ENST00000462553 LAMTOR2Q9Y2Q5 125 aa5.05□□□□□ -1.6
CDC42BPA-210ENST00000462553 GVQW2A0A096LPI5 108 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 hDV102S1A0JD36 115 aa5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 XCL1P47992 114 aa5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 CIRBPQ14011 172 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 RHEBQ15382 184 aa5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 DGAT2L7PQ6IED9 249 aa5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 CLRN3Q8NCR9 226 aa5.04□□□□□ -1.6
CDC42BPA-210ENST00000462553 LOC389332A0A1B0GUA5 103 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 KIAA1644Q3SXP7 199 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 HIGD2BQ4VC39 106 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 SDIM1Q6ZPB5 146 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 Q8N8P6 123 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 OPRPNQ99935 248 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 MAP1LC3AQ9H492 121 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 SPANXA1Q9NS26 97 aa5.03□□□□□ -1.6
CDC42BPA-210ENST00000462553 IGLV4-3A0A075B6K6 122 aa5.02□□□□□ -1.61
CDC42BPA-210ENST00000462553 MRPS36P82909 103 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-210ENST00000462553 SS18Q15532 418 aa5.02□□□□□ -1.61
CDC42BPA-210ENST00000462553 CD164L2Q6UWJ8 174 aa5.02□□□□□ -1.61
CDC42BPA-210ENST00000462553 Q6ZRU5 148 aa5.02□□□□□ -1.61
CDC42BPA-210ENST00000462553 TMEM18Q96B42 140 aa5.02□□□□□ -1.61
CDC42BPA-210ENST00000462553 LPAP08519 4548 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 TRAV13-1A0A0B4J241 112 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 IGHV1-58A0A0C4DH39 117 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 SMAGPQ0VAQ4 97 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 CFAP161Q6P656 301 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 LINC00526Q96FQ7 95 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 GNB1LQ9BYB4 327 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 RPS10P5Q9NQ39 176 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 PYGO1Q9Y3Y4 419 aa5.01□□□□□ -1.61
CDC42BPA-210ENST00000462553 IGHV3-64A0A075B6Q5 118 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 C1orf196B1AJZ1 125 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 CHTF8P0CG12 524 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 S100PP25815 95 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 IFI27P40305 119 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-210ENST00000462553 LINC00173Q6ZV60 143 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 SPACA4Q8TDM5 124 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 YPEL4Q96NS1 127 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 ALKBH7Q9BT30 221 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-210ENST00000462553 AP5S1Q9NUS5 200 aa5□□□□□ -1.61
CDC42BPA-210ENST00000462553 TGIF2-C20orf24A0A0A6YYL0 155 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 IGHV3OR16-9A0A0B4J2B5 98 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 APOC3P02656 99 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 RAB5AP20339 215 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 ODF1Q14990 250 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 ZC2HC1BQ5TFG8 222 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 C2orf66Q6UXQ4 117 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 C5orf38Q86SI9 138 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 AMELXQ99217 191 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 CYSLTR1Q9Y271 337 aa4.99□□□□□ -1.61
CDC42BPA-210ENST00000462553 A0A087WYN8 130 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 IGIPA6NJ69 53 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 IFITM10A6NMD0 228 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 K7EMI3 77 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 COX7A2LO14548 114 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 MT-ND6P03923 174 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 UBE2D1P51668 147 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 COX6A2Q02221 97 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 COX19Q49B96 90 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 ORMDL2Q53FV1 153 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 SVBPQ8N300 66 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 PRSS3P2Q8NHM4 247 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 TMEM141Q96I45 108 aa4.98□□□□□ -1.61
CDC42BPA-210ENST00000462553 IGLV4-69A0A075B6H9 119 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 SNAPINO95295 136 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 NPSP0C0P6 89 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 LINC00242Q5T6M2 205 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 TOMM6Q96B49 74 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 URB1-AS1Q96HZ7 61 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 CARD19Q96LW7 228 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
CDC42BPA-210ENST00000462553 A0A096LNI7 61 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 A0A096LNJ9 63 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 MALP21145 153 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 SPAG11BQ08648 103 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 SYCNQ0VAF6 134 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 FABP9Q0Z7S8 132 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 NDUFA5Q16718 116 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 FAM19A3Q7Z5A8 133 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 C2orf48Q96LS8 159 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 TIMM17AQ99595 171 aa4.96□□□□□ -1.62
CDC42BPA-210ENST00000462553 A0A087WZ39 114 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 PRR3P79522 188 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 TEX43Q6ZNM6 134 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 SLC7A5P1Q8MH63 180 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 OR10D4PQ8NGN7 298 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 C18orf32Q8TCD1 76 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 ORAOV1Q8WV07 137 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 LINC01600Q96MT4 127 aa4.95□□□□□ -1.62
CDC42BPA-210ENST00000462553 IGKV2-24A0A0C4DH68 120 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 1213.6 ms