RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 IFI27L1Q96BM0 104 aa7.52□□□□□ -1.2
HERC4-207ENST00000460168 C19orf73Q9NVV2 129 aa7.52□□□□□ -1.2
HERC4-207ENST00000460168 TRRAPQ9Y4A5 3859 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 A0A096LNJ9 63 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 IGHV3-16A0A0C4DH30 117 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 TEX49A0A1B0GTD5 131 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 D6R8Y8 96 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 VPREB1P12018 145 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
HERC4-207ENST00000460168 CKS2P33552 79 aa7.51□□□□□ -1.21
HERC4-207ENST00000460168 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
HERC4-207ENST00000460168 PAX4O43316 350 aa7.51□□□□□ -1.21
HERC4-207ENST00000460168 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
HERC4-207ENST00000460168 TTTY13Q9BZ97 58 aa7.51□□□□□ -1.21
HERC4-207ENST00000460168 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 A0A087WWL8 130 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 MRPS36P82909 103 aaKnown RBP7.5□□□□□ -1.21
HERC4-207ENST00000460168 RPL18AQ02543 176 aaKnown RBP7.5□□□□□ -1.21
HERC4-207ENST00000460168 WFDC9Q8NEX5 89 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 MUC4Q99102 2169 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 TRBV7-6A0A0J9YX20 115 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 SMKR1H3BMG3 65 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 PRM2P04554 102 aa7.5□□□□□ -1.21
HERC4-207ENST00000460168 C14orf178Q8N769 122 aaPredicted RBP7.5□□□□□ -1.21
HERC4-207ENST00000460168 NXPH4O95158 308 aa7.49□□□□□ -1.21
HERC4-207ENST00000460168 FCER1GP30273 86 aa7.49□□□□□ -1.21
HERC4-207ENST00000460168 APOC4P55056 127 aa7.48□□□□□ -1.21
HERC4-207ENST00000460168 U3KQK5 164 aa7.48□□□□□ -1.21
HERC4-207ENST00000460168 MGPP08493 103 aa7.48□□□□□ -1.21
HERC4-207ENST00000460168 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
HERC4-207ENST00000460168 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
HERC4-207ENST00000460168 LOC389332A0A1B0GUA5 103 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 HBDP02042 147 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 MAPKAPK5-AS1Q8N8E1 139 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 PRSS3P2Q8NHM4 247 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 COL6A5A8TX70 2615 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 FAM74A4Q5TZK3 123 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 LINC00467Q9BRT7 94 aa7.47□□□□□ -1.21
HERC4-207ENST00000460168 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
HERC4-207ENST00000460168 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
HERC4-207ENST00000460168 PLAC8L1A1L4L8 177 aa7.46□□□□□ -1.22
HERC4-207ENST00000460168 IFI27P40305 119 aaPredicted RBP7.46□□□□□ -1.22
HERC4-207ENST00000460168 ATXN8Q156A1 80 aa7.46□□□□□ -1.22
HERC4-207ENST00000460168 ORMDL2Q53FV1 153 aa7.46□□□□□ -1.22
HERC4-207ENST00000460168 F5H697 171 aa7.45□□□□□ -1.22
HERC4-207ENST00000460168 C11orf72Q8NBR9 251 aa7.45□□□□□ -1.22
HERC4-207ENST00000460168 ZNF22P17026 224 aaPredicted RBP7.44□□□□□ -1.22
HERC4-207ENST00000460168 FHL2Q14192 279 aa7.44□□□□□ -1.22
HERC4-207ENST00000460168 SFTA2Q6UW10 78 aa7.44□□□□□ -1.22
HERC4-207ENST00000460168 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
HERC4-207ENST00000460168 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
HERC4-207ENST00000460168 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
HERC4-207ENST00000460168 NRACQ8N912 160 aa7.43□□□□□ -1.22
HERC4-207ENST00000460168 CSNK1G2-AS1Q8NCQ2 148 aa7.43□□□□□ -1.22
HERC4-207ENST00000460168 TMEM243Q9BU79 118 aa7.43□□□□□ -1.22
HERC4-207ENST00000460168 LINC00315P59091 139 aa7.43□□□□□ -1.22
HERC4-207ENST00000460168 TM2D3Q9BRN9 247 aa7.43□□□□□ -1.22
HERC4-207ENST00000460168 SS18Q15532 418 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
HERC4-207ENST00000460168 PKD1L1Q8TDX9 2849 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 PPP1R17O96001 155 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 PIK3CD-AS1Q5SR53 167 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 SERTAD4-AS1Q5TG53 156 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 SUMO4Q6EEV6 95 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 C16orf74Q96GX8 76 aa7.42□□□□□ -1.22
HERC4-207ENST00000460168 TRGV1A0A0A0MS02 117 aa7.41□□□□□ -1.22
HERC4-207ENST00000460168 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
HERC4-207ENST00000460168 IGHV3-73A0A0B4J1V6 119 aa7.4□□□□□ -1.22
HERC4-207ENST00000460168 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
HERC4-207ENST00000460168 Q8N8P6 123 aa7.4□□□□□ -1.23
HERC4-207ENST00000460168 NOP10Q9NPE3 64 aaKnown RBP7.4□□□□□ -1.23
HERC4-207ENST00000460168 A0A0B4J2C4 111 aa7.39□□□□□ -1.23
HERC4-207ENST00000460168 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
HERC4-207ENST00000460168 IGHV4-30-4P0DP06 118 aa7.39□□□□□ -1.23
HERC4-207ENST00000460168 SMIM2Q9BVW6 85 aa7.39□□□□□ -1.23
HERC4-207ENST00000460168 PRO1854Q9UHT4 67 aa7.39□□□□□ -1.23
HERC4-207ENST00000460168 DEFB135Q30KP9 77 aa7.39□□□□□ -1.23
HERC4-207ENST00000460168 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
HERC4-207ENST00000460168 M0QY20 66 aa7.38□□□□□ -1.23
HERC4-207ENST00000460168 TIMM17BO60830 172 aa7.38□□□□□ -1.23
HERC4-207ENST00000460168 KRTAP10-11P60412 298 aa7.38□□□□□ -1.23
HERC4-207ENST00000460168 Q6ZTI0 123 aa7.38□□□□□ -1.23
HERC4-207ENST00000460168 NBEAL2Q6ZNJ1 2754 aa7.38□□□□□ -1.23
HERC4-207ENST00000460168 EGFEM1PQ0D2K5 195 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 SDHAF1A6NFY7 115 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 LINC01546A6NGU7 62 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 CFC1P0CG37 223 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 LAGE3Q14657 143 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
HERC4-207ENST00000460168 TRGV2A0A075B6R0 118 aa7.36□□□□□ -1.23
HERC4-207ENST00000460168 C8orf87E5RJ46 101 aa7.36□□□□□ -1.23
HERC4-207ENST00000460168 CCKP06307 115 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms