RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 NPYP01303 97 aa14.13□□□□□ -0.15
PTPN4-207ENST00000460162 MRPS36P82909 103 aaKnown RBP14.13□□□□□ -0.15
PTPN4-207ENST00000460162 REG3GQ6UW15 175 aa14.13□□□□□ -0.15
PTPN4-207ENST00000460162 FAM104AQ969W3 186 aa14.12□□□□□ -0.15
PTPN4-207ENST00000460162 A0A0J9YXV3 536 aa14.11□□□□□ -0.15
PTPN4-207ENST00000460162 RPL18AQ02543 176 aaKnown RBP14.11□□□□□ -0.15
PTPN4-207ENST00000460162 RNF151Q2KHN1 245 aa14.11□□□□□ -0.15
PTPN4-207ENST00000460162 ATP5L2Q7Z4Y8 100 aa14.11□□□□□ -0.15
PTPN4-207ENST00000460162 IGHV3OR16-9A0A0B4J2B5 98 aa14.1□□□□□ -0.15
PTPN4-207ENST00000460162 F8WDY8 70 aa14.1□□□□□ -0.15
PTPN4-207ENST00000460162 ORAOV1Q8WV07 137 aa14.1□□□□□ -0.15
PTPN4-207ENST00000460162 A0A1W2PNN7 141 aa14.09□□□□□ -0.15
PTPN4-207ENST00000460162 IFITM10A6NMD0 228 aa14.09□□□□□ -0.15
PTPN4-207ENST00000460162 SRSF9Q13242 221 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTPN4-207ENST00000460162 ORMDL3Q8N138 153 aa14.09□□□□□ -0.15
PTPN4-207ENST00000460162 MRPL35Q9NZE8 188 aaKnown RBP14.09□□□□□ -0.15
PTPN4-207ENST00000460162 C9orf116Q5BN46 136 aaPredicted RBP14.08□□□□□ -0.16
PTPN4-207ENST00000460162 OPRPNQ99935 248 aaPredicted RBP14.07□□□□□ -0.16
PTPN4-207ENST00000460162 NDUFA1O15239 70 aa14.06□□□□□ -0.16
PTPN4-207ENST00000460162 IFI27P40305 119 aaPredicted RBP14.06□□□□□ -0.16
PTPN4-207ENST00000460162 RAB5AP20339 215 aa14.05□□□□□ -0.16
PTPN4-207ENST00000460162 TMEM136Q6ZRR5 245 aa14.05□□□□□ -0.16
PTPN4-207ENST00000460162 PRELID3AQ96N28 172 aa14.05□□□□□ -0.16
PTPN4-207ENST00000460162 IMMP2LQ96T52 175 aa14.04□□□□□ -0.16
PTPN4-207ENST00000460162 PYGO1Q9Y3Y4 419 aa14.04□□□□□ -0.16
PTPN4-207ENST00000460162 TGIF2-C20orf24A0A0A6YYL0 155 aa14.03□□□□□ -0.16
PTPN4-207ENST00000460162 PSORS1C2Q9UIG4 136 aa14.03□□□□□ -0.16
PTPN4-207ENST00000460162 LAMTOR2Q9Y2Q5 125 aa14.03□□□□□ -0.16
PTPN4-207ENST00000460162 KRTAP10-8P60410 259 aa14.02□□□□□ -0.17
PTPN4-207ENST00000460162 PNRC1Q12796 327 aaPredicted RBP14.02□□□□□ -0.17
PTPN4-207ENST00000460162 MT-ND6P03923 174 aa14.01□□□□□ -0.17
PTPN4-207ENST00000460162 TLX1NBP0CAT3 122 aa14.01□□□□□ -0.17
PTPN4-207ENST00000460162 LRP2P98164 4655 aa14□□□□□ -0.17
PTPN4-207ENST00000460162 IGLV4-3A0A075B6K6 122 aa14□□□□□ -0.17
PTPN4-207ENST00000460162 A0A087WZ39 114 aa14□□□□□ -0.17
PTPN4-207ENST00000460162 PRSS47A8MTI9 375 aa14□□□□□ -0.17
PTPN4-207ENST00000460162 PHF5AQ7RTV0 110 aaKnown RBP14□□□□□ -0.17
PTPN4-207ENST00000460162 TMEM141Q96I45 108 aa14□□□□□ -0.17
PTPN4-207ENST00000460162 C10orf25Q5T742 122 aa13.99□□□□□ -0.17
PTPN4-207ENST00000460162 MAP1LC3AQ9H492 121 aa13.99□□□□□ -0.17
PTPN4-207ENST00000460162 C6orf48Q9UBA6 75 aa13.99□□□□□ -0.17
PTPN4-207ENST00000460162 LINC00242Q5T6M2 205 aa13.98□□□□□ -0.17
PTPN4-207ENST00000460162 ODF1Q14990 250 aa13.97□□□□□ -0.17
PTPN4-207ENST00000460162 C1orf137Q5JT78 98 aa13.97□□□□□ -0.17
PTPN4-207ENST00000460162 UNQ6190/PRO20217Q6UXQ8 127 aa13.97□□□□□ -0.17
PTPN4-207ENST00000460162 TEX43Q6ZNM6 134 aa13.97□□□□□ -0.17
PTPN4-207ENST00000460162 ANAPC16Q96DE5 110 aa13.97□□□□□ -0.17
PTPN4-207ENST00000460162 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
PTPN4-207ENST00000460162 KIAA0087Q14695 138 aa13.95□□□□□ -0.18
PTPN4-207ENST00000460162 C2orf88Q9BSF0 95 aa13.95□□□□□ -0.18
PTPN4-207ENST00000460162 CYSLTR1Q9Y271 337 aa13.95□□□□□ -0.18
PTPN4-207ENST00000460162 TRBV30A0A0K0K1B3 111 aa13.94□□□□□ -0.18
PTPN4-207ENST00000460162 LOC389332A0A1B0GUA5 103 aa13.94□□□□□ -0.18
PTPN4-207ENST00000460162 Q8N8P6 123 aa13.94□□□□□ -0.18
PTPN4-207ENST00000460162 FAM168BA1KXE4 195 aa13.93□□□□□ -0.18
PTPN4-207ENST00000460162 UBE2D1P51668 147 aa13.93□□□□□ -0.18
PTPN4-207ENST00000460162 C2orf66Q6UXQ4 117 aa13.93□□□□□ -0.18
PTPN4-207ENST00000460162 Q6ZN92 141 aa13.93□□□□□ -0.18
PTPN4-207ENST00000460162 LINC01561Q8N1V8 128 aa13.93□□□□□ -0.18
PTPN4-207ENST00000460162 K7EMI3 77 aa13.92□□□□□ -0.18
PTPN4-207ENST00000460162 FAM19A5Q7Z5A7 132 aaPredicted RBP13.92□□□□□ -0.18
PTPN4-207ENST00000460162 NPSP0C0P6 89 aa13.91□□□□□ -0.18
PTPN4-207ENST00000460162 GAGE2EQ4V326 116 aa13.91□□□□□ -0.18
PTPN4-207ENST00000460162 ORMDL2Q53FV1 153 aa13.91□□□□□ -0.18
PTPN4-207ENST00000460162 GAGE2DQ9UEU5 116 aa13.91□□□□□ -0.18
PTPN4-207ENST00000460162 IGLV7-43P04211 117 aa13.9□□□□□ -0.18
PTPN4-207ENST00000460162 RAB14P61106 215 aa13.9□□□□□ -0.18
PTPN4-207ENST00000460162 LINC00173Q6ZV60 143 aa13.9□□□□□ -0.18
PTPN4-207ENST00000460162 NDUFC2-KCTD14E9PQ53 114 aa13.89□□□□□ -0.19
PTPN4-207ENST00000460162 DIRC1Q969H9 104 aa13.89□□□□□ -0.19
PTPN4-207ENST00000460162 PACRGQ96M98 296 aaPredicted RBP13.89□□□□□ -0.19
PTPN4-207ENST00000460162 AMELXQ99217 191 aa13.89□□□□□ -0.19
PTPN4-207ENST00000460162 C2orf82Q6UX34 121 aa13.88□□□□□ -0.19
PTPN4-207ENST00000460162 VCX2Q9H322 139 aa13.88□□□□□ -0.19
PTPN4-207ENST00000460162 M0QXV9 152 aa13.87□□□□□ -0.19
PTPN4-207ENST00000460162 NXT2Q9NPJ8 142 aaKnown RBP13.87□□□□□ -0.19
PTPN4-207ENST00000460162 FAM19A3Q7Z5A8 133 aa13.86□□□□□ -0.19
PTPN4-207ENST00000460162 KRTAP11-1Q8IUC1 163 aa13.86□□□□□ -0.19
PTPN4-207ENST00000460162 IGIPA6NJ69 53 aa13.85□□□□□ -0.19
PTPN4-207ENST00000460162 ZC2HC1BQ5TFG8 222 aa13.85□□□□□ -0.19
PTPN4-207ENST00000460162 KRTAP7-1Q8IUC3 87 aa13.85□□□□□ -0.19
PTPN4-207ENST00000460162 CTDSP1Q9GZU7 261 aa13.85□□□□□ -0.19
PTPN4-207ENST00000460162 H0Y9J4 135 aa13.84□□□□□ -0.19
PTPN4-207ENST00000460162 PRSS2P07478 247 aa13.84□□□□□ -0.19
PTPN4-207ENST00000460162 PAPPA-AS1Q5QFB9 102 aa13.84□□□□□ -0.19
PTPN4-207ENST00000460162 RNF213Q63HN8 5207 aa13.84□□□□□ -0.19
PTPN4-207ENST00000460162 G0S2P27469 103 aa13.83□□□□□ -0.2
PTPN4-207ENST00000460162 UBE2BP63146 152 aa13.83□□□□□ -0.2
PTPN4-207ENST00000460162 SEC11AP67812 179 aa13.82□□□□□ -0.2
PTPN4-207ENST00000460162 C9orf129Q5T035 196 aaKnown RBP13.82□□□□□ -0.2
PTPN4-207ENST00000460162 Q8IZM0 81 aa13.82□□□□□ -0.2
PTPN4-207ENST00000460162 CKS1BP61024 79 aa13.81□□□□□ -0.2
PTPN4-207ENST00000460162 HERVK_113P63121 156 aa13.81□□□□□ -0.2
PTPN4-207ENST00000460162 TIMM17AQ99595 171 aa13.81□□□□□ -0.2
PTPN4-207ENST00000460162 TOMM7Q9P0U1 55 aa13.81□□□□□ -0.2
PTPN4-207ENST00000460162 CLLU1Q5K131 121 aa13.8□□□□□ -0.2
PTPN4-207ENST00000460162 C6orf226Q5I0X4 101 aa13.78□□□□□ -0.2
PTPN4-207ENST00000460162 PRR26Q8N8Z3 221 aa13.78□□□□□ -0.2
PTPN4-207ENST00000460162 TOMM6Q96B49 74 aa13.78□□□□□ -0.2
PTPN4-207ENST00000460162 ALKBH7Q9BT30 221 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms