RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 LINC00242Q5T6M2 205 aa7.09□□□□□ -1.27
CCDC12-204ENST00000460035 C15orf56Q8N910 161 aa7.09□□□□□ -1.27
CCDC12-204ENST00000460035 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.27
CCDC12-204ENST00000460035 APOMO95445 188 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 COX6A2Q02221 97 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 PMVKQ15126 192 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 LINC01620Q4KN68 170 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 FAM19A2Q8N3H0 131 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
CCDC12-204ENST00000460035 DNAH5Q8TE73 4624 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 IGHV3OR16-9A0A0B4J2B5 98 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 ZNF561-AS1K7EIQ3 104 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 SERF1AO75920 110 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 ATP5LO75964 103 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 PDZD11Q5EBL8 140 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 FAM19A3Q7Z5A8 133 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 LINC00526Q96FQ7 95 aa7.07□□□□□ -1.28
CCDC12-204ENST00000460035 GEMIN7Q9H840 131 aaKnown RBP7.07□□□□□ -1.28
CCDC12-204ENST00000460035 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
CCDC12-204ENST00000460035 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.06□□□□□ -1.28
CCDC12-204ENST00000460035 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BKO60814 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BJP06899 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BOP23527 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BBP33778 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BDP58876 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BCP62807 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 SEC11AP67812 179 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST2H2BEQ16778 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BHQ93079 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BNQ99877 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 HIST1H2BMQ99879 126 aa7.06□□□□□ -1.28
CCDC12-204ENST00000460035 NUPR1O60356 82 aa7.05□□□□□ -1.28
CCDC12-204ENST00000460035 SLPIP03973 132 aa7.05□□□□□ -1.28
CCDC12-204ENST00000460035 LINC00310P59036 64 aa7.05□□□□□ -1.28
CCDC12-204ENST00000460035 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
CCDC12-204ENST00000460035 ORAOV1Q8WV07 137 aa7.05□□□□□ -1.28
CCDC12-204ENST00000460035 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
CCDC12-204ENST00000460035 A0A087WZ39 114 aa7.04□□□□□ -1.28
CCDC12-204ENST00000460035 HERVK_113P63121 156 aa7.04□□□□□ -1.28
CCDC12-204ENST00000460035 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
CCDC12-204ENST00000460035 IFI27L1Q96BM0 104 aa7.04□□□□□ -1.28
CCDC12-204ENST00000460035 IGHV3-64A0A075B6Q5 118 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 FABP4P15090 132 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 LINC01561Q8N1V8 128 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 LINC00469Q8N7U9 141 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
CCDC12-204ENST00000460035 LEPROTL1O95214 131 aa7.02□□□□□ -1.29
CCDC12-204ENST00000460035 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
CCDC12-204ENST00000460035 OR10D4PQ8NGN7 298 aa7.02□□□□□ -1.29
CCDC12-204ENST00000460035 DPH3Q96FX2 82 aa7.02□□□□□ -1.29
CCDC12-204ENST00000460035 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
CCDC12-204ENST00000460035 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
CCDC12-204ENST00000460035 FAM30AQ9NZY2 134 aa7.02□□□□□ -1.29
CCDC12-204ENST00000460035 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 H0Y8G0 127 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 CDK2AP2O75956 126 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 PRSS2P07478 247 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 C2orf48Q96LS8 159 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
CCDC12-204ENST00000460035 CHTOPQ9Y3Y2 248 aaKnown RBP7.01□□□□□ -1.29
CCDC12-204ENST00000460035 H3BRM9 83 aa7□□□□□ -1.29
CCDC12-204ENST00000460035 IGLC3P0DOY3 106 aa7□□□□□ -1.29
CCDC12-204ENST00000460035 SDIM1Q6ZPB5 146 aa7□□□□□ -1.29
CCDC12-204ENST00000460035 Q6ZRU5 148 aa7□□□□□ -1.29
CCDC12-204ENST00000460035 CHAC1Q9BUX1 264 aa7□□□□□ -1.29
CCDC12-204ENST00000460035 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
CCDC12-204ENST00000460035 F8WDY8 70 aa6.99□□□□□ -1.29
CCDC12-204ENST00000460035 NDUFA1O15239 70 aa6.99□□□□□ -1.29
CCDC12-204ENST00000460035 HAMPP81172 84 aa6.99□□□□□ -1.29
CCDC12-204ENST00000460035 C6orf226Q5I0X4 101 aa6.99□□□□□ -1.29
CCDC12-204ENST00000460035 COA6Q5JTJ3 125 aaKnown RBP6.99□□□□□ -1.29
CCDC12-204ENST00000460035 Q6ZSA8 131 aa6.99□□□□□ -1.29
CCDC12-204ENST00000460035 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 C11orf86A6NJI1 115 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 XGP55808 180 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 CKS1BP61024 79 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 TMEM170BQ5T4T1 132 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 UNQ6190/PRO20217Q6UXQ8 127 aa6.98□□□□□ -1.29
CCDC12-204ENST00000460035 SMIM1B2RUZ4 78 aa6.97□□□□□ -1.29
CCDC12-204ENST00000460035 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
CCDC12-204ENST00000460035 C10orf25Q5T742 122 aa6.97□□□□□ -1.29
CCDC12-204ENST00000460035 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
CCDC12-204ENST00000460035 MAP1LC3CQ9BXW4 147 aa6.97□□□□□ -1.29
CCDC12-204ENST00000460035 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
CCDC12-204ENST00000460035 RYR1P21817 5038 aa6.97□□□□□ -1.29
CCDC12-204ENST00000460035 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.29
CCDC12-204ENST00000460035 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
CCDC12-204ENST00000460035 IGKV2-24A0A0C4DH68 120 aa6.96□□□□□ -1.3
CCDC12-204ENST00000460035 F8VRH5 84 aa6.96□□□□□ -1.3
CCDC12-204ENST00000460035 Q8IZM0 81 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms