RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
LMCD1-206ENST00000456506 PPBPP02775 128 aa7.29□□□□□ -1.24
LMCD1-206ENST00000456506 ESDP10768 282 aa7.29□□□□□ -1.24
LMCD1-206ENST00000456506 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
LMCD1-206ENST00000456506 ALKBH7Q9BT30 221 aaPredicted RBP7.29□□□□□ -1.24
LMCD1-206ENST00000456506 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 PRSS47A8MTI9 375 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 CCL25O15444 150 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 ZNF25P17030 456 aaPredicted RBP7.28□□□□□ -1.24
LMCD1-206ENST00000456506 XCL1P47992 114 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 PTTG1IPP53801 180 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 MRPL51Q4U2R6 128 aaKnown RBP7.28□□□□□ -1.24
LMCD1-206ENST00000456506 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
LMCD1-206ENST00000456506 AMN1Q8IY45 258 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 MRAP2Q96G30 205 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 CARD19Q96LW7 228 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 LAMTOR2Q9Y2Q5 125 aa7.28□□□□□ -1.24
LMCD1-206ENST00000456506 TRBV6-5A0A0K0K1A5 114 aa7.27□□□□□ -1.25
LMCD1-206ENST00000456506 SDHAF1A6NFY7 115 aa7.27□□□□□ -1.25
LMCD1-206ENST00000456506 TSHBP01222 138 aa7.26□□□□□ -1.25
LMCD1-206ENST00000456506 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
LMCD1-206ENST00000456506 KIAA1644Q3SXP7 199 aa7.26□□□□□ -1.25
LMCD1-206ENST00000456506 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
LMCD1-206ENST00000456506 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
LMCD1-206ENST00000456506 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
LMCD1-206ENST00000456506 PPP1R17O96001 155 aa7.25□□□□□ -1.25
LMCD1-206ENST00000456506 CD164L2Q6UWJ8 174 aa7.25□□□□□ -1.25
LMCD1-206ENST00000456506 C18orf32Q8TCD1 76 aa7.25□□□□□ -1.25
LMCD1-206ENST00000456506 PKIGQ9Y2B9 76 aa7.25□□□□□ -1.25
LMCD1-206ENST00000456506 C5orf52A6NGY3 159 aa7.24□□□□□ -1.25
LMCD1-206ENST00000456506 D6R8Y8 96 aa7.24□□□□□ -1.25
LMCD1-206ENST00000456506 I3L3M4 83 aa7.24□□□□□ -1.25
LMCD1-206ENST00000456506 CKS2P33552 79 aa7.24□□□□□ -1.25
LMCD1-206ENST00000456506 RPL32P62910 135 aaKnown RBP7.24□□□□□ -1.25
LMCD1-206ENST00000456506 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
LMCD1-206ENST00000456506 NRACQ8N912 160 aa7.24□□□□□ -1.25
LMCD1-206ENST00000456506 PRELID3AQ96N28 172 aa7.24□□□□□ -1.25
LMCD1-206ENST00000456506 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
LMCD1-206ENST00000456506 LOC107984640A0A0U1RRK4 108 aa7.23□□□□□ -1.25
LMCD1-206ENST00000456506 LINC01546A6NGU7 62 aa7.23□□□□□ -1.25
LMCD1-206ENST00000456506 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
LMCD1-206ENST00000456506 C20orf78Q9BR46 151 aa7.23□□□□□ -1.25
LMCD1-206ENST00000456506 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.22□□□□□ -1.25
LMCD1-206ENST00000456506 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
LMCD1-206ENST00000456506 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
LMCD1-206ENST00000456506 GAGE2BQ13066 116 aa7.22□□□□□ -1.25
LMCD1-206ENST00000456506 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
LMCD1-206ENST00000456506 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
LMCD1-206ENST00000456506 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
LMCD1-206ENST00000456506 TRBV27A0A0K0K1C4 114 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 NPYP01303 97 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 PMCHP20382 165 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 NDUFA6P56556 154 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 LINC00310P59036 64 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 SS18Q15532 418 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 ZNF664Q8N3J9 261 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 URB1-AS1Q96HZ7 61 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 TMEM101Q96IK0 257 aa7.21□□□□□ -1.26
LMCD1-206ENST00000456506 PACRGQ96M98 296 aaPredicted RBP7.21□□□□□ -1.26
LMCD1-206ENST00000456506 SMKR1H3BMG3 65 aa7.2□□□□□ -1.26
LMCD1-206ENST00000456506 K7EMI3 77 aa7.2□□□□□ -1.26
LMCD1-206ENST00000456506 APOMO95445 188 aa7.2□□□□□ -1.26
LMCD1-206ENST00000456506 S100A6P06703 90 aa7.2□□□□□ -1.26
LMCD1-206ENST00000456506 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
LMCD1-206ENST00000456506 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
LMCD1-206ENST00000456506 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
LMCD1-206ENST00000456506 NXT2Q9NPJ8 142 aaKnown RBP7.2□□□□□ -1.26
LMCD1-206ENST00000456506 KRTAP1-4P0C5Y4 121 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 LINC00614P0C842 121 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 SUMO2P61956 95 aaKnown RBP7.19□□□□□ -1.26
LMCD1-206ENST00000456506 SNRPEP62304 92 aaKnown RBP7.19□□□□□ -1.26
LMCD1-206ENST00000456506 BAGE3Q86Y29 109 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 Q8N8P6 123 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 C2orf48Q96LS8 159 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 MAP1LC3AQ9H492 121 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 ST20Q9HBF5 79 aa7.19□□□□□ -1.26
LMCD1-206ENST00000456506 NUPR1O60356 82 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 SERF1AO75920 110 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 HIST3H2BBQ8N257 126 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
LMCD1-206ENST00000456506 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
LMCD1-206ENST00000456506 COX7A2LO14548 114 aa7.17□□□□□ -1.26
LMCD1-206ENST00000456506 KRTAP7-1Q8IUC3 87 aa7.17□□□□□ -1.26
LMCD1-206ENST00000456506 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
LMCD1-206ENST00000456506 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
LMCD1-206ENST00000456506 SMIM2Q9BVW6 85 aa7.17□□□□□ -1.26
LMCD1-206ENST00000456506 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
LMCD1-206ENST00000456506 IFITM10A6NMD0 228 aa7.16□□□□□ -1.26
LMCD1-206ENST00000456506 H0Y9J4 135 aa7.16□□□□□ -1.26
LMCD1-206ENST00000456506 VCYO14598 125 aa7.16□□□□□ -1.26
LMCD1-206ENST00000456506 TCAPO15273 167 aa7.16□□□□□ -1.26
LMCD1-206ENST00000456506 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
LMCD1-206ENST00000456506 RNF151Q2KHN1 245 aa7.16□□□□□ -1.26
LMCD1-206ENST00000456506 RNASE13Q5GAN3 156 aaKnown RBP7.16□□□□□ -1.26
LMCD1-206ENST00000456506 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
LMCD1-206ENST00000456506 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms