RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-206ENST00000454852 CHCHD10Q8WYQ3 142 aaPredicted RBP7.51□□□□□ -1.21
TRAF4-206ENST00000454852 C1orf43Q9BWL3 253 aa7.51□□□□□ -1.21
TRAF4-206ENST00000454852 TM2D2Q9BX73 214 aa7.51□□□□□ -1.21
TRAF4-206ENST00000454852 DNAH10Q8IVF4 4471 aa7.51□□□□□ -1.21
TRAF4-206ENST00000454852 IGLV4-69A0A075B6H9 119 aa7.5□□□□□ -1.21
TRAF4-206ENST00000454852 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
TRAF4-206ENST00000454852 HERVK_113P63121 156 aa7.5□□□□□ -1.21
TRAF4-206ENST00000454852 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
TRAF4-206ENST00000454852 LINC01561Q8N1V8 128 aa7.5□□□□□ -1.21
TRAF4-206ENST00000454852 C6orf223Q8N319 242 aa7.5□□□□□ -1.21
TRAF4-206ENST00000454852 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
TRAF4-206ENST00000454852 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
TRAF4-206ENST00000454852 KRTDAPP60985 99 aa7.49□□□□□ -1.21
TRAF4-206ENST00000454852 FOXI1Q12951 378 aa7.49□□□□□ -1.21
TRAF4-206ENST00000454852 CDPF1Q6NVV7 123 aa7.49□□□□□ -1.21
TRAF4-206ENST00000454852 IGLV10-54A0A075B6I4 117 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 IGKV2D-24A0A075B6R9 120 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 A0A0J9YXV3 536 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 M0R2N4 97 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 S100A12P80511 92 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 C1orf134Q5TEV5 83 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 Q9HAA7 133 aa7.48□□□□□ -1.21
TRAF4-206ENST00000454852 MRPL35Q9NZE8 188 aaKnown RBP7.48□□□□□ -1.21
TRAF4-206ENST00000454852 FRAS1Q86XX4 4008 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 A0A087WZ39 114 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 PLNP26678 52 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 XCL1P47992 114 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 COX6A2Q02221 97 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 CHAC1Q9BUX1 264 aa7.47□□□□□ -1.21
TRAF4-206ENST00000454852 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
TRAF4-206ENST00000454852 C20orf202A1L168 122 aa7.46□□□□□ -1.22
TRAF4-206ENST00000454852 C11orf86A6NJI1 115 aa7.46□□□□□ -1.22
TRAF4-206ENST00000454852 DPM2O94777 84 aa7.46□□□□□ -1.22
TRAF4-206ENST00000454852 MAPKAPK5-AS1Q8N8E1 139 aa7.46□□□□□ -1.22
TRAF4-206ENST00000454852 GEMIN7Q9H840 131 aaKnown RBP7.46□□□□□ -1.22
TRAF4-206ENST00000454852 RYR3Q15413 4870 aa7.46□□□□□ -1.22
TRAF4-206ENST00000454852 COX7A2LO14548 114 aa7.45□□□□□ -1.22
TRAF4-206ENST00000454852 ZNF22P17026 224 aaPredicted RBP7.45□□□□□ -1.22
TRAF4-206ENST00000454852 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
TRAF4-206ENST00000454852 H0Y8G0 127 aa7.44□□□□□ -1.22
TRAF4-206ENST00000454852 H3BRM9 83 aa7.44□□□□□ -1.22
TRAF4-206ENST00000454852 IGKCP01834 107 aa7.44□□□□□ -1.22
TRAF4-206ENST00000454852 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
TRAF4-206ENST00000454852 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
TRAF4-206ENST00000454852 RTL8CO15255 209 aa7.43□□□□□ -1.22
TRAF4-206ENST00000454852 LINC00469Q8N7U9 141 aa7.43□□□□□ -1.22
TRAF4-206ENST00000454852 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 TMEM223A0PJW6 202 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 PSCAO43653 123 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 APOMO95445 188 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 C5orf38Q86SI9 138 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 PMCHL2Q9BQD1 86 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 DNAH11Q96DT5 4516 aa7.42□□□□□ -1.22
TRAF4-206ENST00000454852 GVQW2A0A096LPI5 108 aaPredicted RBP7.41□□□□□ -1.22
TRAF4-206ENST00000454852 MALP21145 153 aa7.41□□□□□ -1.22
TRAF4-206ENST00000454852 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
TRAF4-206ENST00000454852 VAMP8Q9BV40 100 aa7.41□□□□□ -1.22
TRAF4-206ENST00000454852 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
TRAF4-206ENST00000454852 A0A087WTM6 91 aa7.4□□□□□ -1.22
TRAF4-206ENST00000454852 USP17L23D6RBM5 183 aa7.4□□□□□ -1.22
TRAF4-206ENST00000454852 F8WDY8 70 aa7.4□□□□□ -1.22
TRAF4-206ENST00000454852 C14orf177Q52M58 125 aa7.4□□□□□ -1.22
TRAF4-206ENST00000454852 LINC00336Q6ZUF6 198 aa7.4□□□□□ -1.22
TRAF4-206ENST00000454852 WFDC2Q14508 124 aa7.39□□□□□ -1.23
TRAF4-206ENST00000454852 KIAA0087Q14695 138 aa7.39□□□□□ -1.23
TRAF4-206ENST00000454852 Q8IZM0 81 aa7.39□□□□□ -1.23
TRAF4-206ENST00000454852 E9PLD3 99 aa7.38□□□□□ -1.23
TRAF4-206ENST00000454852 SPINK8P0C7L1 97 aa7.38□□□□□ -1.23
TRAF4-206ENST00000454852 HERVK_113P61574 105 aa7.38□□□□□ -1.23
TRAF4-206ENST00000454852 ORAOV1Q8WV07 137 aa7.38□□□□□ -1.23
TRAF4-206ENST00000454852 C2orf48Q96LS8 159 aa7.38□□□□□ -1.23
TRAF4-206ENST00000454852 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
TRAF4-206ENST00000454852 LINC00587B1AMM8 73 aa7.37□□□□□ -1.23
TRAF4-206ENST00000454852 DDTP30046 118 aa7.37□□□□□ -1.23
TRAF4-206ENST00000454852 TNP2Q05952 138 aa7.37□□□□□ -1.23
TRAF4-206ENST00000454852 NTN5Q8WTR8 489 aaPredicted RBP7.37□□□□□ -1.23
TRAF4-206ENST00000454852 PKD1P98161 4303 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 LEPROTO15243 131 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 CXCL5P42830 114 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
TRAF4-206ENST00000454852 SPAG11BQ08648 103 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 SPATA45Q537H7 98 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 SFTA2Q6UW10 78 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 Q8N814 137 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 COX7B2Q8TF08 81 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 PLEKHB2Q96CS7 222 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
TRAF4-206ENST00000454852 STPG4Q8N801 248 aa7.35□□□□□ -1.23
TRAF4-206ENST00000454852 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
TRAF4-206ENST00000454852 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms