RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 F8W036 122 aa8.73□□□□□ -1.01
RFTN1-207ENST00000453536 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
RFTN1-207ENST00000453536 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
RFTN1-207ENST00000453536 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
RFTN1-207ENST00000453536 ORAOV1Q8WV07 137 aa8.73□□□□□ -1.01
RFTN1-207ENST00000453536 LINC00173Q6ZV60 143 aa8.72□□□□□ -1.01
RFTN1-207ENST00000453536 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
RFTN1-207ENST00000453536 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.02
RFTN1-207ENST00000453536 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
RFTN1-207ENST00000453536 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
RFTN1-207ENST00000453536 ATP5L2Q7Z4Y8 100 aa8.71□□□□□ -1.02
RFTN1-207ENST00000453536 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.02
RFTN1-207ENST00000453536 S100A8P05109 93 aa8.7□□□□□ -1.02
RFTN1-207ENST00000453536 MRPS36P82909 103 aaKnown RBP8.7□□□□□ -1.02
RFTN1-207ENST00000453536 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
RFTN1-207ENST00000453536 LINC00242Q5T6M2 205 aa8.7□□□□□ -1.02
RFTN1-207ENST00000453536 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
RFTN1-207ENST00000453536 KRTAP7-1Q8IUC3 87 aa8.7□□□□□ -1.02
RFTN1-207ENST00000453536 TMEM18Q96B42 140 aa8.7□□□□□ -1.02
RFTN1-207ENST00000453536 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
RFTN1-207ENST00000453536 APOMO95445 188 aa8.69□□□□□ -1.02
RFTN1-207ENST00000453536 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
RFTN1-207ENST00000453536 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
RFTN1-207ENST00000453536 LRP2P98164 4655 aa8.69□□□□□ -1.02
RFTN1-207ENST00000453536 PPBPP02775 128 aa8.68□□□□□ -1.02
RFTN1-207ENST00000453536 MT-ND4LP03901 98 aa8.68□□□□□ -1.02
RFTN1-207ENST00000453536 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
RFTN1-207ENST00000453536 CLLU1Q5K131 121 aa8.68□□□□□ -1.02
RFTN1-207ENST00000453536 Q6ZRP5 223 aa8.68□□□□□ -1.02
RFTN1-207ENST00000453536 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
RFTN1-207ENST00000453536 RAB5AP20339 215 aa8.67□□□□□ -1.02
RFTN1-207ENST00000453536 IFI27P40305 119 aaPredicted RBP8.67□□□□□ -1.02
RFTN1-207ENST00000453536 RAB14P61106 215 aa8.67□□□□□ -1.02
RFTN1-207ENST00000453536 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
RFTN1-207ENST00000453536 C2orf66Q6UXQ4 117 aa8.67□□□□□ -1.02
RFTN1-207ENST00000453536 Q8N8P6 123 aa8.67□□□□□ -1.02
RFTN1-207ENST00000453536 ANAPC16Q96DE5 110 aa8.67□□□□□ -1.02
RFTN1-207ENST00000453536 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
RFTN1-207ENST00000453536 PRSS47A8MTI9 375 aa8.66□□□□□ -1.02
RFTN1-207ENST00000453536 UBE2D1P51668 147 aa8.66□□□□□ -1.02
RFTN1-207ENST00000453536 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
RFTN1-207ENST00000453536 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
RFTN1-207ENST00000453536 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
RFTN1-207ENST00000453536 SMAGPQ0VAQ4 97 aa8.65□□□□□ -1.02
RFTN1-207ENST00000453536 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
RFTN1-207ENST00000453536 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
RFTN1-207ENST00000453536 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
RFTN1-207ENST00000453536 OR10D4PQ8NGN7 298 aa8.65□□□□□ -1.02
RFTN1-207ENST00000453536 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
RFTN1-207ENST00000453536 A0A087WZ39 114 aa8.64□□□□□ -1.03
RFTN1-207ENST00000453536 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
RFTN1-207ENST00000453536 LINC00474Q9P2X8 69 aa8.64□□□□□ -1.03
RFTN1-207ENST00000453536 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
RFTN1-207ENST00000453536 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
RFTN1-207ENST00000453536 TMEM218A2RU14 115 aa8.63□□□□□ -1.03
RFTN1-207ENST00000453536 IGIPA6NJ69 53 aa8.63□□□□□ -1.03
RFTN1-207ENST00000453536 NDUFA1O15239 70 aa8.63□□□□□ -1.03
RFTN1-207ENST00000453536 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
RFTN1-207ENST00000453536 AMELXQ99217 191 aa8.63□□□□□ -1.03
RFTN1-207ENST00000453536 TEX43Q6ZNM6 134 aa8.62□□□□□ -1.03
RFTN1-207ENST00000453536 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
RFTN1-207ENST00000453536 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
RFTN1-207ENST00000453536 LPAP08519 4548 aa8.61□□□□□ -1.03
RFTN1-207ENST00000453536 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
RFTN1-207ENST00000453536 COMMD7Q86VX2 200 aa8.61□□□□□ -1.03
RFTN1-207ENST00000453536 LAMTOR2Q9Y2Q5 125 aa8.61□□□□□ -1.03
RFTN1-207ENST00000453536 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
RFTN1-207ENST00000453536 RNF151Q2KHN1 245 aa8.6□□□□□ -1.03
RFTN1-207ENST00000453536 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
RFTN1-207ENST00000453536 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
RFTN1-207ENST00000453536 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
RFTN1-207ENST00000453536 TOMM7Q9P0U1 55 aa8.6□□□□□ -1.03
RFTN1-207ENST00000453536 MT-ND6P03923 174 aa8.59□□□□□ -1.03
RFTN1-207ENST00000453536 CDKN2A-AS1Q9UH64 79 aa8.59□□□□□ -1.03
RFTN1-207ENST00000453536 VCX2Q9H322 139 aa8.58□□□□□ -1.04
RFTN1-207ENST00000453536 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
RFTN1-207ENST00000453536 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
RFTN1-207ENST00000453536 ORMDL2Q53FV1 153 aa8.57□□□□□ -1.04
RFTN1-207ENST00000453536 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
RFTN1-207ENST00000453536 UQCC3Q6UW78 93 aa8.56□□□□□ -1.04
RFTN1-207ENST00000453536 Q6ZN92 141 aa8.56□□□□□ -1.04
RFTN1-207ENST00000453536 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
RFTN1-207ENST00000453536 C2orf88Q9BSF0 95 aa8.56□□□□□ -1.04
RFTN1-207ENST00000453536 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
RFTN1-207ENST00000453536 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
RFTN1-207ENST00000453536 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
RFTN1-207ENST00000453536 M0QXV9 152 aa8.55□□□□□ -1.04
RFTN1-207ENST00000453536 SEC11CQ9BY50 192 aa8.55□□□□□ -1.04
RFTN1-207ENST00000453536 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
RFTN1-207ENST00000453536 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
RFTN1-207ENST00000453536 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
RFTN1-207ENST00000453536 A0A096LNJ9 63 aa8.53□□□□□ -1.04
RFTN1-207ENST00000453536 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
RFTN1-207ENST00000453536 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
RFTN1-207ENST00000453536 PRR26Q8N8Z3 221 aa8.53□□□□□ -1.04
RFTN1-207ENST00000453536 SCGB3A1Q96QR1 104 aa8.53□□□□□ -1.04
RFTN1-207ENST00000453536 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
RFTN1-207ENST00000453536 MRPL18Q9H0U6 180 aaKnown RBP8.53□□□□□ -1.04
RFTN1-207ENST00000453536 SMIM1B2RUZ4 78 aa8.52□□□□□ -1.05
RFTN1-207ENST00000453536 SPINK8P0C7L1 97 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms