RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 D6R8Y8 96 aa16.71■□□□□ 0.27
USP42-204ENST00000451154 PEA15Q15121 130 aa16.71■□□□□ 0.27
USP42-204ENST00000451154 SMIM2Q9BVW6 85 aa16.7■□□□□ 0.26
USP42-204ENST00000451154 TCAPO15273 167 aa16.69■□□□□ 0.26
USP42-204ENST00000451154 PSORS1C2Q9UIG4 136 aa16.69■□□□□ 0.26
USP42-204ENST00000451154 NPYP01303 97 aa16.68■□□□□ 0.26
USP42-204ENST00000451154 RNF151Q2KHN1 245 aa16.68■□□□□ 0.26
USP42-204ENST00000451154 OR10D4PQ8NGN7 298 aa16.68■□□□□ 0.26
USP42-204ENST00000451154 ORAOV1Q8WV07 137 aa16.68■□□□□ 0.26
USP42-204ENST00000451154 IGHV3OR16-9A0A0B4J2B5 98 aa16.67■□□□□ 0.26
USP42-204ENST00000451154 F8W036 122 aa16.67■□□□□ 0.26
USP42-204ENST00000451154 MT-ND6P03923 174 aa16.67■□□□□ 0.26
USP42-204ENST00000451154 HBBP68871 147 aa16.67■□□□□ 0.26
USP42-204ENST00000451154 PHF5AQ7RTV0 110 aaKnown RBP16.67■□□□□ 0.26
USP42-204ENST00000451154 SPANXA1Q9NS26 97 aa16.67■□□□□ 0.26
USP42-204ENST00000451154 A0A1B0GXF2 115 aa16.65■□□□□ 0.26
USP42-204ENST00000451154 S100A8P05109 93 aa16.65■□□□□ 0.26
USP42-204ENST00000451154 MRPS36P82909 103 aaKnown RBP16.65■□□□□ 0.26
USP42-204ENST00000451154 C10orf25Q5T742 122 aa16.64■□□□□ 0.25
USP42-204ENST00000451154 MRPL35Q9NZE8 188 aaKnown RBP16.64■□□□□ 0.25
USP42-204ENST00000451154 IFITM10A6NMD0 228 aa16.63■□□□□ 0.25
USP42-204ENST00000451154 SMDT1Q9H4I9 107 aa16.63■□□□□ 0.25
USP42-204ENST00000451154 C1orf137Q5JT78 98 aa16.62■□□□□ 0.25
USP42-204ENST00000451154 UNQ6190/PRO20217Q6UXQ8 127 aa16.62■□□□□ 0.25
USP42-204ENST00000451154 NDUFA1O15239 70 aa16.61■□□□□ 0.25
USP42-204ENST00000451154 PPBPP02775 128 aa16.61■□□□□ 0.25
USP42-204ENST00000451154 F8WDY8 70 aa16.6■□□□□ 0.25
USP42-204ENST00000451154 IMMP2LQ96T52 175 aa16.6■□□□□ 0.25
USP42-204ENST00000451154 FAM168BA1KXE4 195 aa16.59■□□□□ 0.25
USP42-204ENST00000451154 TMEM136Q6ZRR5 245 aa16.59■□□□□ 0.25
USP42-204ENST00000451154 RAB5AP20339 215 aa16.58■□□□□ 0.24
USP42-204ENST00000451154 ORMDL3Q8N138 153 aa16.58■□□□□ 0.24
USP42-204ENST00000451154 PRELID3AQ96N28 172 aa16.57■□□□□ 0.24
USP42-204ENST00000451154 C6orf48Q9UBA6 75 aa16.57■□□□□ 0.24
USP42-204ENST00000451154 TGIF2-C20orf24A0A0A6YYL0 155 aa16.55■□□□□ 0.24
USP42-204ENST00000451154 IFI27P40305 119 aaPredicted RBP16.55■□□□□ 0.24
USP42-204ENST00000451154 KRTAP11-1Q8IUC1 163 aa16.55■□□□□ 0.24
USP42-204ENST00000451154 A0A087WZ39 114 aa16.54■□□□□ 0.24
USP42-204ENST00000451154 TLX1NBP0CAT3 122 aa16.54■□□□□ 0.24
USP42-204ENST00000451154 GAGE2EQ4V326 116 aa16.54■□□□□ 0.24
USP42-204ENST00000451154 LINC00242Q5T6M2 205 aa16.54■□□□□ 0.24
USP42-204ENST00000451154 GAGE2DQ9UEU5 116 aa16.54■□□□□ 0.24
USP42-204ENST00000451154 PYGO1Q9Y3Y4 419 aa16.54■□□□□ 0.24
USP42-204ENST00000451154 IGLV4-3A0A075B6K6 122 aa16.53■□□□□ 0.24
USP42-204ENST00000451154 KIAA0087Q14695 138 aa16.53■□□□□ 0.24
USP42-204ENST00000451154 ATP5L2Q7Z4Y8 100 aa16.53■□□□□ 0.24
USP42-204ENST00000451154 LOC389332A0A1B0GUA5 103 aa16.52■□□□□ 0.24
USP42-204ENST00000451154 IGLV7-43P04211 117 aa16.52■□□□□ 0.24
USP42-204ENST00000451154 FAM19A5Q7Z5A7 132 aaPredicted RBP16.52■□□□□ 0.24
USP42-204ENST00000451154 TMEM141Q96I45 108 aa16.5■□□□□ 0.23
USP42-204ENST00000451154 C2orf82Q6UX34 121 aa16.49■□□□□ 0.23
USP42-204ENST00000451154 KRTAP7-1Q8IUC3 87 aa16.49■□□□□ 0.23
USP42-204ENST00000451154 PRSS47A8MTI9 375 aa16.48■□□□□ 0.23
USP42-204ENST00000451154 ZC2HC1BQ5TFG8 222 aa16.48■□□□□ 0.23
USP42-204ENST00000451154 DIRC1Q969H9 104 aa16.48■□□□□ 0.23
USP42-204ENST00000451154 TEX43Q6ZNM6 134 aa16.46■□□□□ 0.23
USP42-204ENST00000451154 PRR26Q8N8Z3 221 aa16.46■□□□□ 0.23
USP42-204ENST00000451154 MAP1LC3AQ9H492 121 aa16.46■□□□□ 0.23
USP42-204ENST00000451154 UBE2D1P51668 147 aa16.45■□□□□ 0.22
USP42-204ENST00000451154 LAMTOR2Q9Y2Q5 125 aa16.44■□□□□ 0.22
USP42-204ENST00000451154 TRBV30A0A0K0K1B3 111 aa16.43■□□□□ 0.22
USP42-204ENST00000451154 Q8N8P6 123 aa16.43■□□□□ 0.22
USP42-204ENST00000451154 H0Y9J4 135 aa16.42■□□□□ 0.22
USP42-204ENST00000451154 C2orf66Q6UXQ4 117 aa16.42■□□□□ 0.22
USP42-204ENST00000451154 C2orf88Q9BSF0 95 aa16.42■□□□□ 0.22
USP42-204ENST00000451154 CYSLTR1Q9Y271 337 aa16.42■□□□□ 0.22
USP42-204ENST00000451154 LPAP08519 4548 aa16.42■□□□□ 0.22
USP42-204ENST00000451154 NDUFC2-KCTD14E9PQ53 114 aa16.41■□□□□ 0.22
USP42-204ENST00000451154 M0QXV9 152 aa16.41■□□□□ 0.22
USP42-204ENST00000451154 C9orf129Q5T035 196 aaKnown RBP16.41■□□□□ 0.22
USP42-204ENST00000451154 PACRGQ96M98 296 aaPredicted RBP16.41■□□□□ 0.22
USP42-204ENST00000451154 VCX2Q9H322 139 aa16.41■□□□□ 0.22
USP42-204ENST00000451154 UBE2BP63146 152 aa16.4■□□□□ 0.22
USP42-204ENST00000451154 LINC00173Q6ZV60 143 aa16.4■□□□□ 0.22
USP42-204ENST00000451154 LINC01561Q8N1V8 128 aa16.4■□□□□ 0.22
USP42-204ENST00000451154 AMELXQ99217 191 aa16.4■□□□□ 0.22
USP42-204ENST00000451154 MT-ND4LP03901 98 aa16.39■□□□□ 0.21
USP42-204ENST00000451154 Q6ZN92 141 aa16.39■□□□□ 0.21
USP42-204ENST00000451154 ANAPC16Q96DE5 110 aa16.38■□□□□ 0.21
USP42-204ENST00000451154 PNRC1Q12796 327 aaPredicted RBP16.37■□□□□ 0.21
USP42-204ENST00000451154 TOMM7Q9P0U1 55 aa16.37■□□□□ 0.21
USP42-204ENST00000451154 PRSS2P07478 247 aa16.36■□□□□ 0.21
USP42-204ENST00000451154 ORMDL2Q53FV1 153 aa16.36■□□□□ 0.21
USP42-204ENST00000451154 IGIPA6NJ69 53 aa16.35■□□□□ 0.21
USP42-204ENST00000451154 C6orf226Q5I0X4 101 aa16.34■□□□□ 0.21
USP42-204ENST00000451154 KRTAP1-4P0C5Y4 121 aa16.33■□□□□ 0.2
USP42-204ENST00000451154 CKS1BP61024 79 aa16.33■□□□□ 0.2
USP42-204ENST00000451154 LINC00469Q8N7U9 141 aa16.33■□□□□ 0.2
USP42-204ENST00000451154 ALKBH7Q9BT30 221 aaPredicted RBP16.31■□□□□ 0.2
USP42-204ENST00000451154 K7EMI3 77 aa16.3■□□□□ 0.2
USP42-204ENST00000451154 NPSP0C0P6 89 aa16.3■□□□□ 0.2
USP42-204ENST00000451154 FAM19A3Q7Z5A8 133 aa16.3■□□□□ 0.2
USP42-204ENST00000451154 CTDSP1Q9GZU7 261 aa16.3■□□□□ 0.2
USP42-204ENST00000451154 NXT2Q9NPJ8 142 aaKnown RBP16.3■□□□□ 0.2
USP42-204ENST00000451154 IGLV1-50A0A075B6I6 118 aa16.29■□□□□ 0.2
USP42-204ENST00000451154 Q8IZM0 81 aa16.29■□□□□ 0.2
USP42-204ENST00000451154 CDKN2A-AS1Q9UH64 79 aa16.29■□□□□ 0.2
USP42-204ENST00000451154 RAB14P61106 215 aa16.28■□□□□ 0.2
USP42-204ENST00000451154 XAGE1AQ9HD64 81 aa16.27■□□□□ 0.2
USP42-204ENST00000451154 C22orf24Q9Y442 160 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms