RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RPL37AP61513 92 aaKnown RBP8.87□□□□□ -0.99
RTFDC1-204ENST00000449062 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
RTFDC1-204ENST00000449062 CARHSP1Q9Y2V2 147 aaKnown RBP8.87□□□□□ -0.99
RTFDC1-204ENST00000449062 MALP21145 153 aa8.86□□□□□ -0.99
RTFDC1-204ENST00000449062 Q6ZRU5 148 aa8.86□□□□□ -0.99
RTFDC1-204ENST00000449062 C2orf48Q96LS8 159 aa8.86□□□□□ -0.99
RTFDC1-204ENST00000449062 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
RTFDC1-204ENST00000449062 IGIPA6NJ69 53 aa8.85□□□□□ -0.99
RTFDC1-204ENST00000449062 K7EMI3 77 aa8.85□□□□□ -0.99
RTFDC1-204ENST00000449062 KIAA1644Q3SXP7 199 aa8.85□□□□□ -0.99
RTFDC1-204ENST00000449062 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
RTFDC1-204ENST00000449062 C2orf66Q6UXQ4 117 aa8.85□□□□□ -0.99
RTFDC1-204ENST00000449062 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
RTFDC1-204ENST00000449062 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 IFITM10A6NMD0 228 aa8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 MAJINQ3KP22 176 aa8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 LINC00173Q6ZV60 143 aa8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 AMELXQ99217 191 aa8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
RTFDC1-204ENST00000449062 NPSP0C0P6 89 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 KIAA0087Q14695 138 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 ORMDL2Q53FV1 153 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 STPG4Q8N801 248 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 OR10D4PQ8NGN7 298 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 CYSLTR1Q9Y271 337 aa8.83□□□□□ -1
RTFDC1-204ENST00000449062 A0A087WZ39 114 aa8.82□□□□□ -1
RTFDC1-204ENST00000449062 LINC01546A6NGU7 62 aa8.82□□□□□ -1
RTFDC1-204ENST00000449062 APOMO95445 188 aa8.82□□□□□ -1
RTFDC1-204ENST00000449062 UBE2D1P51668 147 aa8.82□□□□□ -1
RTFDC1-204ENST00000449062 RNF151Q2KHN1 245 aa8.82□□□□□ -1
RTFDC1-204ENST00000449062 ALKBH7Q9BT30 221 aaPredicted RBP8.82□□□□□ -1
RTFDC1-204ENST00000449062 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
RTFDC1-204ENST00000449062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
RTFDC1-204ENST00000449062 PTTG1IPP53801 180 aa8.81□□□□□ -1
RTFDC1-204ENST00000449062 SPAG11BQ08648 103 aa8.81□□□□□ -1
RTFDC1-204ENST00000449062 FAM19A3Q7Z5A8 133 aa8.81□□□□□ -1
RTFDC1-204ENST00000449062 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
RTFDC1-204ENST00000449062 LOC107984640A0A0U1RRK4 108 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 F8WDY8 70 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 OXTP01178 125 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 S100PP25815 95 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 RHEBQ15382 184 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 C10orf25Q5T742 122 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 TOMM6Q96B49 74 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
RTFDC1-204ENST00000449062 A0A0J9YXV3 536 aa8.79□□□□□ -1
RTFDC1-204ENST00000449062 COX19Q49B96 90 aa8.79□□□□□ -1
RTFDC1-204ENST00000449062 TEX43Q6ZNM6 134 aa8.79□□□□□ -1
RTFDC1-204ENST00000449062 LINC01561Q8N1V8 128 aa8.79□□□□□ -1
RTFDC1-204ENST00000449062 VCX2Q9H322 139 aa8.79□□□□□ -1
RTFDC1-204ENST00000449062 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
RTFDC1-204ENST00000449062 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
RTFDC1-204ENST00000449062 A0A1W2PNN7 141 aa8.78□□□□□ -1
RTFDC1-204ENST00000449062 J3QL48 77 aa8.78□□□□□ -1
RTFDC1-204ENST00000449062 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
RTFDC1-204ENST00000449062 TIMM17AQ99595 171 aa8.78□□□□□ -1
RTFDC1-204ENST00000449062 TGIF2-C20orf24A0A0A6YYL0 155 aa8.77□□□□□ -1.01
RTFDC1-204ENST00000449062 G0S2P27469 103 aa8.77□□□□□ -1.01
RTFDC1-204ENST00000449062 GAGE2BQ13066 116 aa8.77□□□□□ -1.01
RTFDC1-204ENST00000449062 MT-ND6P03923 174 aa8.76□□□□□ -1.01
RTFDC1-204ENST00000449062 ERASQ7Z444 233 aa8.76□□□□□ -1.01
RTFDC1-204ENST00000449062 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
RTFDC1-204ENST00000449062 MRPL18Q9H0U6 180 aaKnown RBP8.76□□□□□ -1.01
RTFDC1-204ENST00000449062 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
RTFDC1-204ENST00000449062 NDUFA1O15239 70 aa8.75□□□□□ -1.01
RTFDC1-204ENST00000449062 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
RTFDC1-204ENST00000449062 FABP9Q0Z7S8 132 aa8.75□□□□□ -1.01
RTFDC1-204ENST00000449062 Q6ZN92 141 aa8.75□□□□□ -1.01
RTFDC1-204ENST00000449062 C2orf88Q9BSF0 95 aa8.75□□□□□ -1.01
RTFDC1-204ENST00000449062 APOC3P02656 99 aa8.74□□□□□ -1.01
RTFDC1-204ENST00000449062 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
RTFDC1-204ENST00000449062 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
RTFDC1-204ENST00000449062 MT1HL1P0DM35 61 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 PAPPA-AS1Q5QFB9 102 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 Q6ZRP5 223 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 YPEL4Q96NS1 127 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
RTFDC1-204ENST00000449062 HMCN2Q8NDA2 5059 aa8.72□□□□□ -1.01
RTFDC1-204ENST00000449062 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
RTFDC1-204ENST00000449062 TNXBP22105 4242 aa8.71□□□□□ -1.01
RTFDC1-204ENST00000449062 A0A096LNJ9 63 aa8.71□□□□□ -1.02
RTFDC1-204ENST00000449062 LINC01549A6NIU2 74 aa8.71□□□□□ -1.02
RTFDC1-204ENST00000449062 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.02
RTFDC1-204ENST00000449062 CST9LQ9H4G1 147 aa8.71□□□□□ -1.02
RTFDC1-204ENST00000449062 TRBV30A0A0K0K1B3 111 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 SNAPINO95295 136 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 HERVK_113P63121 156 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 SEC11AP67812 179 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 SVBPQ8N300 66 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 C18orf32Q8TCD1 76 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 TRAPPC1Q9Y5R8 145 aa8.7□□□□□ -1.02
RTFDC1-204ENST00000449062 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms