RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 GAS8-AS1O95177 125 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 COX6A2Q02221 97 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 FAM104BQ5XKR9 115 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 CD164L2Q6UWJ8 174 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 C20orf78Q9BR46 151 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 A0A087WYN8 130 aa7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 S100A2P29034 98 aa7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 FOXI1Q12951 378 aa7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 CIRBPQ14011 172 aaKnown RBP7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 MAJINQ3KP22 176 aa7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 MRPL51Q4U2R6 128 aaKnown RBP7.01□□□□□ -1.29
NPIPB3-202ENST00000448012 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
NPIPB3-202ENST00000448012 COX7A2LO14548 114 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 APOMO95445 188 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 PPBPP02775 128 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 SLPIP03973 132 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 CHTF8P0CG12 524 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 SMIM6P0DI80 62 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 NRACQ8N912 160 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 SPACA4Q8TDM5 124 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 CARD19Q96LW7 228 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 CSDC2Q9Y534 153 aaKnown RBP7□□□□□ -1.29
NPIPB3-202ENST00000448012 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
NPIPB3-202ENST00000448012 TRAV13-1A0A0B4J241 112 aa6.99□□□□□ -1.29
NPIPB3-202ENST00000448012 PANO1I0J062 215 aa6.99□□□□□ -1.29
NPIPB3-202ENST00000448012 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
NPIPB3-202ENST00000448012 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
NPIPB3-202ENST00000448012 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 TNFRSF6BO95407 300 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 RPL32P62910 135 aaKnown RBP6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 PDZD11Q5EBL8 140 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 SERTAD4-AS1Q5TG53 156 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 STPG4Q8N801 248 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 PRSS3P2Q8NHM4 247 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 TIMM21Q9BVV7 248 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
NPIPB3-202ENST00000448012 D6R8Y8 96 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 FABP4P15090 132 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 KRTAP10-4P60372 401 aaPredicted RBP6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 KIAA1644Q3SXP7 199 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 BAGE3Q86Y29 109 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 LINC00518Q8N0U6 118 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 ORMDL3Q8N138 153 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 HIST1H2BLQ99880 126 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 SMIM2Q9BVW6 85 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 SPANXA1Q9NS26 97 aa6.97□□□□□ -1.29
NPIPB3-202ENST00000448012 SERF1AO75920 110 aa6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 Q6ZRU5 148 aa6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 OR10D4PQ8NGN7 298 aa6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.3
NPIPB3-202ENST00000448012 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 LOC107984640A0A0U1RRK4 108 aa6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 Q6ZUT4 128 aa6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 C12orf57Q99622 126 aa6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-202ENST00000448012 A0A096LNI7 61 aa6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 NPYP01303 97 aa6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 IFI27P40305 119 aaPredicted RBP6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 LINC00310P59036 64 aa6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 GAGE2BQ13066 116 aa6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
NPIPB3-202ENST00000448012 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
NPIPB3-202ENST00000448012 SPAG11BQ08648 103 aa6.93□□□□□ -1.3
NPIPB3-202ENST00000448012 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
NPIPB3-202ENST00000448012 MAP1LC3AQ9H492 121 aa6.93□□□□□ -1.3
NPIPB3-202ENST00000448012 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-202ENST00000448012 Q6ZN92 141 aa6.92□□□□□ -1.3
NPIPB3-202ENST00000448012 F8WDY8 70 aa6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 NUPR1O60356 82 aa6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 HNRNPA3P51991 378 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 RPL18AQ02543 176 aaKnown RBP6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 C2orf88Q9BSF0 95 aa6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 MYCBP2O75592 4640 aa6.91□□□□□ -1.3
NPIPB3-202ENST00000448012 LOC389332A0A1B0GUA5 103 aa6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 NDUFA1O15239 70 aa6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 HSBP1O75506 76 aa6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 G0S2P27469 103 aa6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 PYY3Q5JQD4 70 aa6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 CHCHD1Q96BP2 118 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-202ENST00000448012 JOSD1Q15040 202 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-202ENST00000448012 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
NPIPB3-202ENST00000448012 ORMDL2Q53FV1 153 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms