RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 HERC1Q15751 4861 aa9.32□□□□□ -0.92
USE1-202ENST00000445667 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
USE1-202ENST00000445667 J3QL48 77 aa9.32□□□□□ -0.92
USE1-202ENST00000445667 APOMO95445 188 aa9.32□□□□□ -0.92
USE1-202ENST00000445667 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
USE1-202ENST00000445667 STPG4Q8N801 248 aa9.32□□□□□ -0.92
USE1-202ENST00000445667 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
USE1-202ENST00000445667 TRAV9-1A0A075B6T8 112 aa9.31□□□□□ -0.92
USE1-202ENST00000445667 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
USE1-202ENST00000445667 C2orf66Q6UXQ4 117 aa9.31□□□□□ -0.92
USE1-202ENST00000445667 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
USE1-202ENST00000445667 S100PP25815 95 aa9.3□□□□□ -0.92
USE1-202ENST00000445667 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
USE1-202ENST00000445667 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
USE1-202ENST00000445667 C10orf91Q5T1B1 145 aa9.3□□□□□ -0.92
USE1-202ENST00000445667 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
USE1-202ENST00000445667 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
USE1-202ENST00000445667 CYSLTR1Q9Y271 337 aa9.3□□□□□ -0.92
USE1-202ENST00000445667 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
USE1-202ENST00000445667 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
USE1-202ENST00000445667 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
USE1-202ENST00000445667 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
USE1-202ENST00000445667 RPS10P5Q9NQ39 176 aa9.29□□□□□ -0.92
USE1-202ENST00000445667 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
USE1-202ENST00000445667 TEX43Q6ZNM6 134 aa9.28□□□□□ -0.92
USE1-202ENST00000445667 OR10D4PQ8NGN7 298 aa9.28□□□□□ -0.92
USE1-202ENST00000445667 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
USE1-202ENST00000445667 PKIGQ9Y2B9 76 aa9.28□□□□□ -0.92
USE1-202ENST00000445667 CARHSP1Q9Y2V2 147 aaKnown RBP9.28□□□□□ -0.92
USE1-202ENST00000445667 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.92
USE1-202ENST00000445667 LRP1Q07954 4544 aaKnown RBP9.27□□□□□ -0.92
USE1-202ENST00000445667 TGIF2-C20orf24A0A0A6YYL0 155 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 K7EMI3 77 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 UBE2D1P51668 147 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 C7orf33Q8WU49 177 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 GNB1LQ9BYB4 327 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 VCX2Q9H322 139 aa9.27□□□□□ -0.93
USE1-202ENST00000445667 IGIPA6NJ69 53 aa9.26□□□□□ -0.93
USE1-202ENST00000445667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
USE1-202ENST00000445667 Q6ZN92 141 aa9.26□□□□□ -0.93
USE1-202ENST00000445667 AMELXQ99217 191 aa9.26□□□□□ -0.93
USE1-202ENST00000445667 A0A087WZ39 114 aa9.25□□□□□ -0.93
USE1-202ENST00000445667 RHEBQ15382 184 aa9.25□□□□□ -0.93
USE1-202ENST00000445667 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
USE1-202ENST00000445667 C2orf88Q9BSF0 95 aa9.25□□□□□ -0.93
USE1-202ENST00000445667 ALKBH7Q9BT30 221 aaPredicted RBP9.25□□□□□ -0.93
USE1-202ENST00000445667 OXTP01178 125 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
USE1-202ENST00000445667 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 UNQ6190/PRO20217Q6UXQ8 127 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 TOMM6Q96B49 74 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
USE1-202ENST00000445667 PKHD1L1Q86WI1 4243 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 FAT3Q8TDW7 4589 aa9.24□□□□□ -0.93
USE1-202ENST00000445667 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
USE1-202ENST00000445667 NDUFA1O15239 70 aa9.23□□□□□ -0.93
USE1-202ENST00000445667 G0S2P27469 103 aa9.23□□□□□ -0.93
USE1-202ENST00000445667 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
USE1-202ENST00000445667 COX19Q49B96 90 aa9.23□□□□□ -0.93
USE1-202ENST00000445667 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
USE1-202ENST00000445667 APOC3P02656 99 aa9.22□□□□□ -0.93
USE1-202ENST00000445667 NPSP0C0P6 89 aa9.22□□□□□ -0.93
USE1-202ENST00000445667 F8WDY8 70 aa9.21□□□□□ -0.94
USE1-202ENST00000445667 MT-ND6P03923 174 aa9.21□□□□□ -0.94
USE1-202ENST00000445667 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
USE1-202ENST00000445667 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
USE1-202ENST00000445667 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.94
USE1-202ENST00000445667 PRR3P79522 188 aaKnown RBP9.2□□□□□ -0.94
USE1-202ENST00000445667 C9orf116Q5BN46 136 aaPredicted RBP9.2□□□□□ -0.94
USE1-202ENST00000445667 PAPPA-AS1Q5QFB9 102 aa9.2□□□□□ -0.94
USE1-202ENST00000445667 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
USE1-202ENST00000445667 ERASQ7Z444 233 aa9.2□□□□□ -0.94
USE1-202ENST00000445667 LINC01546A6NGU7 62 aa9.19□□□□□ -0.94
USE1-202ENST00000445667 FA2HQ7L5A8 372 aa9.19□□□□□ -0.94
USE1-202ENST00000445667 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
USE1-202ENST00000445667 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
USE1-202ENST00000445667 Q6ZRP5 223 aa9.18□□□□□ -0.94
USE1-202ENST00000445667 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
USE1-202ENST00000445667 TRAPPC1Q9Y5R8 145 aa9.18□□□□□ -0.94
USE1-202ENST00000445667 SNAPINO95295 136 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 HERVK_113P63121 156 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 NDUFA5Q16718 116 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 GEMIN7Q9H840 131 aaKnown RBP9.17□□□□□ -0.94
USE1-202ENST00000445667 SMCO4Q9NRQ5 59 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 TOMM7Q9P0U1 55 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
USE1-202ENST00000445667 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
USE1-202ENST00000445667 SEC11AP67812 179 aa9.16□□□□□ -0.94
USE1-202ENST00000445667 SVBPQ8N300 66 aa9.16□□□□□ -0.94
USE1-202ENST00000445667 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
USE1-202ENST00000445667 PRSS2P07478 247 aa9.15□□□□□ -0.94
USE1-202ENST00000445667 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.94
USE1-202ENST00000445667 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
USE1-202ENST00000445667 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
USE1-202ENST00000445667 TRBV30A0A0K0K1B3 111 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms