RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 CIRBPQ14011 172 aaKnown RBP8.61□□□□□ -1.03
GARNL3-208ENST00000444677 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
GARNL3-208ENST00000444677 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
GARNL3-208ENST00000444677 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
GARNL3-208ENST00000444677 LINC00173Q6ZV60 143 aa8.6□□□□□ -1.03
GARNL3-208ENST00000444677 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
GARNL3-208ENST00000444677 TMEM141Q96I45 108 aa8.6□□□□□ -1.03
GARNL3-208ENST00000444677 A0A087WYN8 130 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 LINC00242Q5T6M2 205 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 Q6ZRU5 148 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
GARNL3-208ENST00000444677 A0A096LNI7 61 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 SNAPINO95295 136 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
GARNL3-208ENST00000444677 UBE2D1P51668 147 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 SPAG11BQ08648 103 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 MAJINQ3KP22 176 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 COX19Q49B96 90 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 SVBPQ8N300 66 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 AMELXQ99217 191 aa8.58□□□□□ -1.04
GARNL3-208ENST00000444677 K7EMI3 77 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 MT-ND6P03923 174 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 TEX43Q6ZNM6 134 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
GARNL3-208ENST00000444677 A0A0J9YXV3 536 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 APOMO95445 188 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 VCX2Q9H322 139 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 TRAPPC1Q9Y5R8 145 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 MYCBP2O75592 4640 aa8.56□□□□□ -1.04
GARNL3-208ENST00000444677 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-208ENST00000444677 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
GARNL3-208ENST00000444677 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
GARNL3-208ENST00000444677 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
GARNL3-208ENST00000444677 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
GARNL3-208ENST00000444677 A0A087WZ39 114 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
GARNL3-208ENST00000444677 GAGE2BQ13066 116 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 KIAA0087Q14695 138 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 Q6ZN92 141 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 FA2HQ7L5A8 372 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 STPG4Q8N801 248 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 OR10D4PQ8NGN7 298 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
GARNL3-208ENST00000444677 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
GARNL3-208ENST00000444677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-208ENST00000444677 HNRNPA3P51991 378 aaKnown RBP8.53□□□□□ -1.04
GARNL3-208ENST00000444677 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
GARNL3-208ENST00000444677 C2orf88Q9BSF0 95 aa8.53□□□□□ -1.04
GARNL3-208ENST00000444677 NPSP0C0P6 89 aa8.52□□□□□ -1.05
GARNL3-208ENST00000444677 ERASQ7Z444 233 aa8.52□□□□□ -1.05
GARNL3-208ENST00000444677 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
GARNL3-208ENST00000444677 C18orf32Q8TCD1 76 aa8.52□□□□□ -1.05
GARNL3-208ENST00000444677 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-208ENST00000444677 A0A096LNJ9 63 aa8.51□□□□□ -1.05
GARNL3-208ENST00000444677 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
GARNL3-208ENST00000444677 G0S2P27469 103 aa8.51□□□□□ -1.05
GARNL3-208ENST00000444677 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
GARNL3-208ENST00000444677 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
GARNL3-208ENST00000444677 SMCO4Q9NRQ5 59 aa8.51□□□□□ -1.05
GARNL3-208ENST00000444677 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
GARNL3-208ENST00000444677 HERC1Q15751 4861 aa8.5□□□□□ -1.05
GARNL3-208ENST00000444677 C2orf82Q6UX34 121 aa8.5□□□□□ -1.05
GARNL3-208ENST00000444677 C6orf48Q9UBA6 75 aa8.5□□□□□ -1.05
GARNL3-208ENST00000444677 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
GARNL3-208ENST00000444677 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
GARNL3-208ENST00000444677 RNF151Q2KHN1 245 aa8.49□□□□□ -1.05
GARNL3-208ENST00000444677 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
GARNL3-208ENST00000444677 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
GARNL3-208ENST00000444677 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 J3QL48 77 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 NDUFA1O15239 70 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 LINC00614P0C842 121 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 LINC01561Q8N1V8 128 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
GARNL3-208ENST00000444677 HERVK_113P63121 156 aa8.47□□□□□ -1.05
GARNL3-208ENST00000444677 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
GARNL3-208ENST00000444677 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
GARNL3-208ENST00000444677 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
GARNL3-208ENST00000444677 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
GARNL3-208ENST00000444677 F8WDY8 70 aa8.46□□□□□ -1.06
GARNL3-208ENST00000444677 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.06
GARNL3-208ENST00000444677 Q6ZRP5 223 aa8.46□□□□□ -1.06
GARNL3-208ENST00000444677 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
GARNL3-208ENST00000444677 PKIGQ9Y2B9 76 aa8.46□□□□□ -1.06
GARNL3-208ENST00000444677 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
GARNL3-208ENST00000444677 PMVKQ15126 192 aa8.45□□□□□ -1.06
GARNL3-208ENST00000444677 PDZD11Q5EBL8 140 aa8.45□□□□□ -1.06
GARNL3-208ENST00000444677 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
GARNL3-208ENST00000444677 C7orf33Q8WU49 177 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms