RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
SSBP3-208ENST00000444533 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-208ENST00000444533 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
SSBP3-208ENST00000444533 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
SSBP3-208ENST00000444533 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
SSBP3-208ENST00000444533 PACRGQ96M98 296 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-208ENST00000444533 PKIGQ9Y2B9 76 aa9.22□□□□□ -0.93
SSBP3-208ENST00000444533 IGHV3OR16-9A0A0B4J2B5 98 aa9.21□□□□□ -0.94
SSBP3-208ENST00000444533 CNBPP62633 177 aaKnown RBP9.21□□□□□ -0.94
SSBP3-208ENST00000444533 LINC00173Q6ZV60 143 aa9.21□□□□□ -0.94
SSBP3-208ENST00000444533 OR10D4PQ8NGN7 298 aa9.21□□□□□ -0.94
SSBP3-208ENST00000444533 CST9LQ9H4G1 147 aa9.21□□□□□ -0.94
SSBP3-208ENST00000444533 HECTD4Q9Y4D8 3996 aa9.2□□□□□ -0.94
SSBP3-208ENST00000444533 SERF1AO75920 110 aa9.2□□□□□ -0.94
SSBP3-208ENST00000444533 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
SSBP3-208ENST00000444533 ZC2HC1BQ5TFG8 222 aa9.2□□□□□ -0.94
SSBP3-208ENST00000444533 IGHV3-64A0A075B6Q5 118 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 A0A087WZ39 114 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 A0A096LNJ9 63 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 PRSS2P07478 247 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 SPAG11BQ08648 103 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 LINC00469Q8N7U9 141 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 ORAOV1Q8WV07 137 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
SSBP3-208ENST00000444533 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 H3BRM9 83 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 LEPROTL1O95214 131 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 FAM19A2Q8N3H0 131 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 C9orf163Q8N9P6 203 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 IFI27L1Q96BM0 104 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 CAMK2N2Q96S95 79 aa9.18□□□□□ -0.94
SSBP3-208ENST00000444533 A0A0J9YXV3 536 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 F8WDY8 70 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 COX6A2Q02221 97 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 CARD19Q96LW7 228 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 EPPK1P58107 5090 aaKnown RBP9.17□□□□□ -0.94
SSBP3-208ENST00000444533 PKD1P98161 4303 aa9.17□□□□□ -0.94
SSBP3-208ENST00000444533 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 C2orf48Q96LS8 159 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
SSBP3-208ENST00000444533 LINC01620Q4KN68 170 aa9.15□□□□□ -0.94
SSBP3-208ENST00000444533 DPH3Q96FX2 82 aa9.15□□□□□ -0.94
SSBP3-208ENST00000444533 NDUFA1O15239 70 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 CKS1BP61024 79 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 C6orf226Q5I0X4 101 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 CHAC1Q9BUX1 264 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 TOMM7Q9P0U1 55 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 CDKN2A-AS1Q9UH64 79 aa9.14□□□□□ -0.95
SSBP3-208ENST00000444533 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
SSBP3-208ENST00000444533 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
SSBP3-208ENST00000444533 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
SSBP3-208ENST00000444533 FABP4P15090 132 aa9.13□□□□□ -0.95
SSBP3-208ENST00000444533 H0Y8G0 127 aa9.12□□□□□ -0.95
SSBP3-208ENST00000444533 IGLC3P0DOY3 106 aa9.12□□□□□ -0.95
SSBP3-208ENST00000444533 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
SSBP3-208ENST00000444533 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
SSBP3-208ENST00000444533 SLPIP03973 132 aa9.11□□□□□ -0.95
SSBP3-208ENST00000444533 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
SSBP3-208ENST00000444533 Q8IZM0 81 aa9.11□□□□□ -0.95
SSBP3-208ENST00000444533 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
SSBP3-208ENST00000444533 CXCL5P42830 114 aa9.1□□□□□ -0.95
SSBP3-208ENST00000444533 LINC00310P59036 64 aa9.1□□□□□ -0.95
SSBP3-208ENST00000444533 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
SSBP3-208ENST00000444533 Q6ZRU5 148 aa9.1□□□□□ -0.95
SSBP3-208ENST00000444533 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
SSBP3-208ENST00000444533 F8VRH5 84 aa9.09□□□□□ -0.95
SSBP3-208ENST00000444533 NUPR1O60356 82 aa9.09□□□□□ -0.95
SSBP3-208ENST00000444533 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
SSBP3-208ENST00000444533 MRPL35Q9NZE8 188 aaKnown RBP9.09□□□□□ -0.95
SSBP3-208ENST00000444533 TRBV30A0A0K0K1B3 111 aa9.08□□□□□ -0.96
SSBP3-208ENST00000444533 SMIM1B2RUZ4 78 aa9.08□□□□□ -0.96
SSBP3-208ENST00000444533 SPINK8P0C7L1 97 aa9.08□□□□□ -0.96
SSBP3-208ENST00000444533 Q6ZSA8 131 aa9.08□□□□□ -0.96
SSBP3-208ENST00000444533 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
SSBP3-208ENST00000444533 DNAH11Q96DT5 4516 aa9.08□□□□□ -0.96
SSBP3-208ENST00000444533 S100A6P06703 90 aa9.07□□□□□ -0.96
SSBP3-208ENST00000444533 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-208ENST00000444533 PLNP26678 52 aa9.07□□□□□ -0.96
SSBP3-208ENST00000444533 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
SSBP3-208ENST00000444533 IGKV2-24A0A0C4DH68 120 aa9.06□□□□□ -0.96
SSBP3-208ENST00000444533 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
SSBP3-208ENST00000444533 RPL18AQ02543 176 aaKnown RBP9.06□□□□□ -0.96
SSBP3-208ENST00000444533 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
SSBP3-208ENST00000444533 COA6Q5JTJ3 125 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms