RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 Q8N9L7 120 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 Q8NA96 180 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 HIGD2AQ9BW72 106 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 MSMPQ1L6U9 139 aa3.73□□□□□ -1.81
SCN11A-202ENST00000444237 LINC00337Q8N6G1 96 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 IGLV10-54A0A075B6I4 117 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 ZNF73O43830 326 aaPredicted RBP3.72□□□□□ -1.81
SCN11A-202ENST00000444237 GYPEP15421 78 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 LCA10Q71F78 164 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 IGKV4-1P06312 121 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 ATP11AUNQ6ZP68 121 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 Q8IZM0 81 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 CHCHD7Q9BUK0 85 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 ODF3BA8MYP8 253 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 C7orf65Q6ZTY9 151 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 Q8N2B8 174 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 CDC42SE2Q9NRR3 84 aa3.72□□□□□ -1.81
SCN11A-202ENST00000444237 TRBV6-8A0A0A6YYG3 113 aa3.71□□□□□ -1.81
SCN11A-202ENST00000444237 TRAV10A0A0B4J240 114 aa3.71□□□□□ -1.81
SCN11A-202ENST00000444237 H0Y9J4 135 aa3.71□□□□□ -1.81
SCN11A-202ENST00000444237 LY6LH3BQJ8 138 aa3.71□□□□□ -1.81
SCN11A-202ENST00000444237 WFDC13Q8IUB5 93 aa3.71□□□□□ -1.81
SCN11A-202ENST00000444237 ROS1P08922 2347 aa3.71□□□□□ -1.81
SCN11A-202ENST00000444237 LOC110117498A0A087WWA1 95 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 DEFB113Q30KQ7 82 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
SCN11A-202ENST00000444237 B4DSR2 109 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 K7ERS5 55 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 TM2D3Q9BRN9 247 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 BPESC1Q9GZL8 116 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 K7EQG2 157 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 CD164L2Q6UWJ8 174 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 SEM1Q6ZVN7 128 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 LINC01356Q8N9X3 169 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 PROK1P58294 105 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 LITAFQ99732 161 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 LRP4O75096 1905 aa3.71□□□□□ -1.82
SCN11A-202ENST00000444237 POLEQ07864 2286 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 COX6A2Q02221 97 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 LINC00575Q6W349 94 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 KIF25-AS1Q9Y6Z4 181 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 A0A096LPF7 62 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 SPTBN1Q01082 2364 aaKnown RBP3.7□□□□□ -1.82
SCN11A-202ENST00000444237 PRM2P04554 102 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 CADP27708 2225 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 ARHGAP32A7KAX9 2087 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 PKDREJQ9NTG1 2253 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 DHRS4-AS1Q9P1J3 65 aa3.7□□□□□ -1.82
SCN11A-202ENST00000444237 Q6ZQT0 140 aa3.69□□□□□ -1.82
SCN11A-202ENST00000444237 PRRC2AP48634 2157 aaKnown RBP3.69□□□□□ -1.82
SCN11A-202ENST00000444237 IGLV5-45A0A087WSX0 123 aa3.69□□□□□ -1.82
SCN11A-202ENST00000444237 A8MUN3 132 aa3.69□□□□□ -1.82
SCN11A-202ENST00000444237 C8orf87E5RJ46 101 aa3.69□□□□□ -1.82
SCN11A-202ENST00000444237 M0R378 163 aa3.69□□□□□ -1.82
SCN11A-202ENST00000444237 MRGPRG-AS1Q2M3A8 158 aa3.69□□□□□ -1.82
SCN11A-202ENST00000444237 CHCHD10Q8WYQ3 142 aaPredicted RBP3.69□□□□□ -1.82
SCN11A-202ENST00000444237 C10orf142B7Z368 130 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 C19orf84I3L1E1 186 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 CDSNQ15517 529 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 Q6ZTI0 123 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 LINC00959A0A1B0GUT2 108 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 H3BPC8 53 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 C10orf25Q5T742 122 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 CNOT1A5YKK6 2376 aaKnown RBP3.68□□□□□ -1.82
SCN11A-202ENST00000444237 NAV3Q8IVL0 2385 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 CUL9Q8IWT3 2517 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 A0A1B0GW54 56 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 H0Y9P7 68 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 SPTBN2O15020 2390 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 RIF1Q5UIP0 2472 aaKnown RBP3.68□□□□□ -1.82
SCN11A-202ENST00000444237 IGHV4-30-2A0A087WSY4 118 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 MSMBP08118 114 aa3.68□□□□□ -1.82
SCN11A-202ENST00000444237 TRAV22A0A0B4J277 110 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 IGHV4-59P01825 116 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 RBM12B-AS1Q9P1G2 102 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 PTPRBP23467 1997 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 PRR14LQ5THK1 2151 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 C6orf223Q8N319 242 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 CREBBPQ92793 2442 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 LINC00315P59091 139 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 ADAMTS20P59510 1910 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 PRO0255Q9UI72 69 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 F8W735 103 aaPredicted RBP3.67□□□□□ -1.82
SCN11A-202ENST00000444237 MAP6D1Q9H9H5 199 aa3.67□□□□□ -1.82
SCN11A-202ENST00000444237 CEP350Q5VT06 3117 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 A0A0J9YWU9 116 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 DNAJC9-AS1A6NH13 148 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 ABCA4P78363 2273 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 IGKV2D-24A0A075B6R9 120 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 Q1T7F1 81 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 C1orf137Q5JT78 98 aa3.66□□□□□ -1.82
SCN11A-202ENST00000444237 SLURP1P55000 103 aa3.65□□□□□ -1.82
SCN11A-202ENST00000444237 ELOF1P60002 83 aaKnown RBP3.65□□□□□ -1.82
SCN11A-202ENST00000444237 XAGE1AQ9HD64 81 aa3.65□□□□□ -1.82
SCN11A-202ENST00000444237 APC2O95996 2303 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms