RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 CATR1Q13166 79 aa-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 MRPL54Q6P161 138 aaKnown RBP-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 DEFB105AQ8NG35 78 aa-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 SNRNP25Q9BV90 132 aaKnown RBP-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 UQCR10Q9UDW1 63 aa-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 CPSF1Q10570 1443 aaKnown RBP-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 TRBV7-4A0A0J9YYF1 115 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 GNG7O60262 68 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 APOC2P02655 101 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 Q56UQ5 140 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 C8orf59Q8N0T1 100 aaPredicted RBP-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 PHLPP1O60346 1717 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 USH2AO75445 5202 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 HIVEP1P15822 2718 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 CHKB-CPT1BH3BT56 60 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 COX8AP10176 69 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 SELENOWP63302 87 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 KLK9Q2XQG4 91 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 CCDC58Q4VC31 144 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 NEBP20929 6669 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 SETD2Q9BYW2 2564 aaPredicted RBP-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 SSSCA1O60232 199 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 WHAMMP3Q1A5X7 153 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 DEFB123Q8N688 67 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 TSC22D3Q99576 134 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 LINC00470Q9BZP3 86 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 NXT2Q9NPJ8 142 aaKnown RBP-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 HYDINQ4G0P3 5121 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 LOC105371267A0A1B0GV96 52 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 TMEM263Q8WUH6 116 aaKnown RBP-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 SPANXDQ9BXN6 97 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 IQSEC2Q5JU85 1478 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 FOCADQ5VW36 1801 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 BICRAQ9NZM4 1560 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 TGP01266 2768 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 MXRA5Q9NR99 2828 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 C10orf113Q5VZT2 155 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 COMMD6Q7Z4G1 85 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 USMG5Q96IX5 58 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 ARL2-SNX15V9GYD0 113 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 KIAA1109Q2LD37 5005 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 SETBP1Q9Y6X0 1596 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 KTN1Q86UP2 1357 aaKnown RBP-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 MYOM1P52179 1685 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 RYR3Q15413 4870 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 IGLC1P0CG04 106 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 C5orf38Q86SI9 138 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 FAM223AQ8IWN6 122 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 PRO1933Q9H354 126 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 FLGP20930 4061 aaPredicted RBP-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 RYR1P21817 5038 aa-0.72□□□□□ -2.52
LINC00354-202ENST00000440860 FAM107BQ9H098 131 aa-0.72□□□□□ -2.52
LINC00354-202ENST00000440860 UBR4Q5T4S7 5183 aa-0.72□□□□□ -2.53
LINC00354-202ENST00000440860 NSD3Q9BZ95 1437 aa-0.72□□□□□ -2.53
LINC00354-202ENST00000440860 EPPK1P58107 5090 aaKnown RBP-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 PRKDCP78527 4128 aaKnown RBP-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 KIAA0556O60303 1618 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 GNG11P61952 73 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 LINC01600Q96MT4 127 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 MANBALQ9NQG1 85 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 APLNQ9ULZ1 77 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 SVEP1Q4LDE5 3571 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 MAGI1Q96QZ7 1491 aaPredicted RBP-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 FMN2Q9NZ56 1722 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 LINC00959A0A1B0GUT2 108 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 TRAPPC2P0DI81 140 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 TRAPPC2BP0DI82 140 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 PCNX1Q96RV3 2341 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 USP9YO00507 2555 aaPredicted RBP-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 EPG5Q9HCE0 2579 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 HMGXB3Q12766 1538 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 A0A1B0GWA3 101 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 F6UZH7 168 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 AKAIN1P0CW23 69 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 FGF7P21781 194 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 C9orf153Q5TBE3 101 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 ITPR3Q14573 2671 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 ROBO1Q9Y6N7 1651 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 STARD9Q9P2P6 4700 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 UBE2L5PA0A1B0GUS4 154 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 SNAPC5O75971 98 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 UBE2L3P68036 154 aaKnown RBP-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 BTG2P78543 158 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 SFTA2Q6UW10 78 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 FAM167A-AS1Q96KT0 104 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 LINC00474Q9P2X8 69 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 SMG6Q86US8 1419 aaKnown RBP-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 TULP4Q9NRJ4 1543 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 ARHGEF5Q12774 1597 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 ZFHX3Q15911 3703 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 HECTD1Q9ULT8 2610 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 SCN7AQ01118 1682 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 SHROOM2Q13796 1616 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 MBD5Q9P267 1494 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 PKHD1P08F94 4074 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 FAM24AA6NFZ4 105 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 CPSF4LA6NMK7 179 aaKnown RBP-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 SEC11AP67812 179 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 DEFB135Q30KP9 77 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 9506 ms