RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 IGLV4-3A0A075B6K6 122 aa15.29■□□□□ 0.04
CPNE1-217ENST00000439669 A0A087WYN8 130 aa15.29■□□□□ 0.04
CPNE1-217ENST00000439669 RPL37AP61513 92 aaKnown RBP15.29■□□□□ 0.04
CPNE1-217ENST00000439669 C2orf66Q6UXQ4 117 aa15.29■□□□□ 0.04
CPNE1-217ENST00000439669 TMEM141Q96I45 108 aa15.29■□□□□ 0.04
CPNE1-217ENST00000439669 MAJINQ3KP22 176 aa15.28■□□□□ 0.04
CPNE1-217ENST00000439669 PKIGQ9Y2B9 76 aa15.28■□□□□ 0.04
CPNE1-217ENST00000439669 K7EMI3 77 aa15.27■□□□□ 0.04
CPNE1-217ENST00000439669 SRRM2Q9UQ35 2752 aaKnown RBP15.26■□□□□ 0.03
CPNE1-217ENST00000439669 KRTAP10-4P60372 401 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-217ENST00000439669 SPAG11BQ08648 103 aa15.26■□□□□ 0.03
CPNE1-217ENST00000439669 CAMK2N2Q96S95 79 aa15.26■□□□□ 0.03
CPNE1-217ENST00000439669 GNB1LQ9BYB4 327 aa15.26■□□□□ 0.03
CPNE1-217ENST00000439669 A0A096LNI7 61 aa15.25■□□□□ 0.03
CPNE1-217ENST00000439669 IGHV3OR16-9A0A0B4J2B5 98 aa15.25■□□□□ 0.03
CPNE1-217ENST00000439669 Q6ZN92 141 aa15.25■□□□□ 0.03
CPNE1-217ENST00000439669 TEX43Q6ZNM6 134 aa15.25■□□□□ 0.03
CPNE1-217ENST00000439669 TGIF2-C20orf24A0A0A6YYL0 155 aa15.24■□□□□ 0.03
CPNE1-217ENST00000439669 COX19Q49B96 90 aa15.24■□□□□ 0.03
CPNE1-217ENST00000439669 Q6ZRU5 148 aa15.24■□□□□ 0.03
CPNE1-217ENST00000439669 ORAOV1Q8WV07 137 aa15.24■□□□□ 0.03
CPNE1-217ENST00000439669 C2orf88Q9BSF0 95 aa15.24■□□□□ 0.03
CPNE1-217ENST00000439669 C2orf48Q96LS8 159 aa15.23■□□□□ 0.03
CPNE1-217ENST00000439669 PLAC8Q9NZF1 115 aa15.23■□□□□ 0.03
CPNE1-217ENST00000439669 OR10D4PQ8NGN7 298 aa15.22■□□□□ 0.03
CPNE1-217ENST00000439669 APOC3P02656 99 aa15.21■□□□□ 0.03
CPNE1-217ENST00000439669 MT-ND6P03923 174 aa15.21■□□□□ 0.03
CPNE1-217ENST00000439669 G0S2P27469 103 aa15.21■□□□□ 0.03
CPNE1-217ENST00000439669 NDUFA5Q16718 116 aa15.21■□□□□ 0.03
CPNE1-217ENST00000439669 STPG4Q8N801 248 aa15.21■□□□□ 0.03
CPNE1-217ENST00000439669 LINC00474Q9P2X8 69 aa15.21■□□□□ 0.03
CPNE1-217ENST00000439669 LINC00242Q5T6M2 205 aa15.2■□□□□ 0.02
CPNE1-217ENST00000439669 ZC2HC1BQ5TFG8 222 aa15.2■□□□□ 0.02
CPNE1-217ENST00000439669 ALKBH7Q9BT30 221 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-217ENST00000439669 MRPL18Q9H0U6 180 aaKnown RBP15.2■□□□□ 0.02
CPNE1-217ENST00000439669 VCX2Q9H322 139 aa15.2■□□□□ 0.02
CPNE1-217ENST00000439669 IGIPA6NJ69 53 aa15.19■□□□□ 0.02
CPNE1-217ENST00000439669 UBE2D1P51668 147 aa15.19■□□□□ 0.02
CPNE1-217ENST00000439669 FABP9Q0Z7S8 132 aa15.19■□□□□ 0.02
CPNE1-217ENST00000439669 LOC107984640A0A0U1RRK4 108 aa15.18■□□□□ 0.02
CPNE1-217ENST00000439669 NPSP0C0P6 89 aa15.18■□□□□ 0.02
CPNE1-217ENST00000439669 LINC00173Q6ZV60 143 aa15.18■□□□□ 0.02
CPNE1-217ENST00000439669 GAGE2BQ13066 116 aa15.17■□□□□ 0.02
CPNE1-217ENST00000439669 AMELXQ99217 191 aa15.17■□□□□ 0.02
CPNE1-217ENST00000439669 A0A087WZ39 114 aa15.16■□□□□ 0.02
CPNE1-217ENST00000439669 SNAPINO95295 136 aa15.16■□□□□ 0.02
CPNE1-217ENST00000439669 PAPPA-AS1Q5QFB9 102 aa15.16■□□□□ 0.02
CPNE1-217ENST00000439669 SVBPQ8N300 66 aa15.16■□□□□ 0.02
CPNE1-217ENST00000439669 C7orf33Q8WU49 177 aa15.16■□□□□ 0.02
CPNE1-217ENST00000439669 TOMM6Q96B49 74 aa15.16■□□□□ 0.02
CPNE1-217ENST00000439669 PTTG1IPP53801 180 aa15.15■□□□□ 0.02
CPNE1-217ENST00000439669 J3QL48 77 aa15.14■□□□□ 0.01
CPNE1-217ENST00000439669 TIMM17AQ99595 171 aa15.14■□□□□ 0.01
CPNE1-217ENST00000439669 A0A0J9YXV3 536 aa15.13■□□□□ 0.01
CPNE1-217ENST00000439669 F8WDY8 70 aa15.13■□□□□ 0.01
CPNE1-217ENST00000439669 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-217ENST00000439669 NDUFA1O15239 70 aa15.13■□□□□ 0.01
CPNE1-217ENST00000439669 RPL18AQ02543 176 aaKnown RBP15.13■□□□□ 0.01
CPNE1-217ENST00000439669 FA2HQ7L5A8 372 aa15.13■□□□□ 0.01
CPNE1-217ENST00000439669 SCGB3A1Q96QR1 104 aa15.13■□□□□ 0.01
CPNE1-217ENST00000439669 MYCBP2O75592 4640 aa15.12■□□□□ 0.01
CPNE1-217ENST00000439669 DMBT1Q9UGM3 2413 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-217ENST00000439669 SMCO4Q9NRQ5 59 aa15.12■□□□□ 0.01
CPNE1-217ENST00000439669 MRPL35Q9NZE8 188 aaKnown RBP15.12■□□□□ 0.01
CPNE1-217ENST00000439669 TRAPPC1Q9Y5R8 145 aa15.12■□□□□ 0.01
CPNE1-217ENST00000439669 HNRNPA3P51991 378 aaKnown RBP15.11■□□□□ 0.01
CPNE1-217ENST00000439669 RNF151Q2KHN1 245 aa15.11■□□□□ 0.01
CPNE1-217ENST00000439669 LINC01546A6NGU7 62 aa15.1■□□□□ 0.01
CPNE1-217ENST00000439669 ERASQ7Z444 233 aa15.1■□□□□ 0.01
CPNE1-217ENST00000439669 KRTAP29-1A8MX34 341 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-217ENST00000439669 C10orf25Q5T742 122 aa15.09■□□□□ 0.01
CPNE1-217ENST00000439669 UNQ6190/PRO20217Q6UXQ8 127 aa15.09■□□□□ 0.01
CPNE1-217ENST00000439669 SEC11AP67812 179 aa15.08■□□□□ 0
CPNE1-217ENST00000439669 LINC01561Q8N1V8 128 aa15.08■□□□□ 0
CPNE1-217ENST00000439669 LINC01549A6NIU2 74 aa15.07■□□□□ 0
CPNE1-217ENST00000439669 KIAA0087Q14695 138 aa15.07■□□□□ 0
CPNE1-217ENST00000439669 FAM19A3Q7Z5A8 133 aa15.07■□□□□ 0
CPNE1-217ENST00000439669 GEMIN7Q9H840 131 aaKnown RBP15.07■□□□□ 0
CPNE1-217ENST00000439669 HERVK_113P63121 156 aa15.06■□□□□ 0
CPNE1-217ENST00000439669 C6orf48Q9UBA6 75 aa15.06■□□□□ 0
CPNE1-217ENST00000439669 PRSS2P07478 247 aa15.04■□□□□ -0
CPNE1-217ENST00000439669 C2orf82Q6UX34 121 aa15.04■□□□□ -0
CPNE1-217ENST00000439669 PACRGQ96M98 296 aaPredicted RBP15.04■□□□□ -0
CPNE1-217ENST00000439669 TOMM7Q9P0U1 55 aa15.04■□□□□ -0
CPNE1-217ENST00000439669 C18orf32Q8TCD1 76 aa15.03■□□□□ -0
CPNE1-217ENST00000439669 CDKN2A-AS1Q9UH64 79 aa15.03■□□□□ -0
CPNE1-217ENST00000439669 A0A1W2PNN7 141 aa15.02■□□□□ -0
CPNE1-217ENST00000439669 PRR3P79522 188 aaKnown RBP15.02■□□□□ -0
CPNE1-217ENST00000439669 C9orf116Q5BN46 136 aaPredicted RBP15.02■□□□□ -0
CPNE1-217ENST00000439669 OXTP01178 125 aa15.01□□□□□ -0.01
CPNE1-217ENST00000439669 LINC00469Q8N7U9 141 aa15.01□□□□□ -0.01
CPNE1-217ENST00000439669 TRBV30A0A0K0K1B3 111 aa15□□□□□ -0.01
CPNE1-217ENST00000439669 TLX1NBP0CAT3 122 aa15□□□□□ -0.01
CPNE1-217ENST00000439669 CKS1BP61024 79 aa14.99□□□□□ -0.01
CPNE1-217ENST00000439669 GAGE2EQ4V326 116 aa14.99□□□□□ -0.01
CPNE1-217ENST00000439669 Q6ZRP5 223 aa14.99□□□□□ -0.01
CPNE1-217ENST00000439669 CST9LQ9H4G1 147 aa14.99□□□□□ -0.01
CPNE1-217ENST00000439669 GAGE2DQ9UEU5 116 aa14.99□□□□□ -0.01
CPNE1-217ENST00000439669 LINC00614P0C842 121 aa14.98□□□□□ -0.01
CPNE1-217ENST00000439669 PMVKQ15126 192 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms