RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZFYVE26Q68DK2 2539 aa6.52□□□□□ -1.37
COPB1-202ENST00000439561 K7EQD1 137 aa6.52□□□□□ -1.37
COPB1-202ENST00000439561 NBL1P41271 181 aa6.52□□□□□ -1.37
COPB1-202ENST00000439561 COX7B2Q8TF08 81 aa6.52□□□□□ -1.37
COPB1-202ENST00000439561 ATOX1O00244 68 aa6.52□□□□□ -1.37
COPB1-202ENST00000439561 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
COPB1-202ENST00000439561 LOC100131303A0A0U1RQF7 123 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 A0A087WYN8 130 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 A0A096LPF7 62 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 J3KT08 172 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 DEFB130BP0DP73 79 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 DEFB130AP0DP74 79 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 XCL1P47992 114 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 LINC01356Q8N9X3 169 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 SMIM11BQ8TCY0 68 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 FAM104AQ969W3 186 aa6.51□□□□□ -1.37
COPB1-202ENST00000439561 TMEM89A2RUT3 159 aa6.5□□□□□ -1.37
COPB1-202ENST00000439561 COX7CP15954 63 aa6.5□□□□□ -1.37
COPB1-202ENST00000439561 MTORP42345 2549 aa6.5□□□□□ -1.37
COPB1-202ENST00000439561 PKD1L2Q7Z442 2459 aa6.5□□□□□ -1.37
COPB1-202ENST00000439561 ANKRD17O75179 2603 aaKnown RBP6.5□□□□□ -1.37
COPB1-202ENST00000439561 TMEM86BQ8N661 226 aa6.49□□□□□ -1.37
COPB1-202ENST00000439561 WFDC9Q8NEX5 89 aa6.49□□□□□ -1.37
COPB1-202ENST00000439561 OVOL2Q9BRP0 275 aa6.49□□□□□ -1.37
COPB1-202ENST00000439561 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
COPB1-202ENST00000439561 PIEZO1Q92508 2521 aa6.49□□□□□ -1.37
COPB1-202ENST00000439561 TRAV23DV6A0A075B6W5 121 aa6.48□□□□□ -1.37
COPB1-202ENST00000439561 BRI3O95415 125 aa6.48□□□□□ -1.37
COPB1-202ENST00000439561 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
COPB1-202ENST00000439561 LINC00526Q96FQ7 95 aa6.48□□□□□ -1.37
COPB1-202ENST00000439561 DSCR8Q96T75 97 aa6.48□□□□□ -1.37
COPB1-202ENST00000439561 ORMDL1Q9P0S3 153 aa6.48□□□□□ -1.37
COPB1-202ENST00000439561 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
COPB1-202ENST00000439561 NTM-AS1Q6ZSK4 140 aa6.47□□□□□ -1.37
COPB1-202ENST00000439561 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
COPB1-202ENST00000439561 H0YGX0 51 aa6.47□□□□□ -1.37
COPB1-202ENST00000439561 CCL18P55774 89 aa6.47□□□□□ -1.37
COPB1-202ENST00000439561 DEFB121Q5J5C9 76 aa6.47□□□□□ -1.37
COPB1-202ENST00000439561 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
COPB1-202ENST00000439561 RPL18AQ02543 176 aaKnown RBP6.46□□□□□ -1.37
COPB1-202ENST00000439561 C11orf72Q8NBR9 251 aa6.46□□□□□ -1.37
COPB1-202ENST00000439561 LAMTOR3Q9UHA4 124 aa6.46□□□□□ -1.37
COPB1-202ENST00000439561 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 CXCL5P42830 114 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 RNF152Q8N8N0 203 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 Q96MF0 132 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 WFDC10AQ9H1F0 79 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 PLA2G2AP14555 144 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 HAMPP81172 84 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 DEFB114Q30KQ6 69 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 ZNF702PQ9H963 129 aa6.46□□□□□ -1.38
COPB1-202ENST00000439561 HIVEP2P31629 2446 aa6.45□□□□□ -1.38
COPB1-202ENST00000439561 PF4P02776 101 aa6.45□□□□□ -1.38
COPB1-202ENST00000439561 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
COPB1-202ENST00000439561 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
COPB1-202ENST00000439561 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
COPB1-202ENST00000439561 RPL28P46779 137 aaKnown RBP6.45□□□□□ -1.38
COPB1-202ENST00000439561 ZANQ9Y493 2812 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 IGLV4-60A0A075B6I1 120 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 LRRC75A-AS1Q8N1F1 130 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 KIR2DL5BQ8NHK3 375 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
COPB1-202ENST00000439561 ITPR1Q14643 2758 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 NOTCH2Q04721 2471 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 BSNQ9UPA5 3926 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 GHRHP01286 108 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 DOPEY1Q5JWR5 2465 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 HILS1P60008 231 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 C1orf158Q8N1D5 194 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 UBL5Q9BZL1 73 aa6.44□□□□□ -1.38
COPB1-202ENST00000439561 PRB1P04280 392 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 ODF3L2Q3SX64 289 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 FAM222AQ5U5X8 452 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 ENHOQ6UWT2 76 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 CHD6Q8TD26 2715 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 SS18Q15532 418 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 ESM1Q9NQ30 184 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 IGKV2-28A0A075B6P5 120 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 IGKV2D-28P01615 120 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 BEAN1Q3B7T3 259 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 ACANP16112 2415 aa6.43□□□□□ -1.38
COPB1-202ENST00000439561 CRYBG3Q68DQ2 2970 aa6.42□□□□□ -1.38
COPB1-202ENST00000439561 DSCR9P59020 149 aa6.42□□□□□ -1.38
COPB1-202ENST00000439561 SMIM9A6NGZ8 99 aa6.41□□□□□ -1.38
COPB1-202ENST00000439561 F5H768 121 aa6.41□□□□□ -1.38
COPB1-202ENST00000439561 HTN3P15516 51 aa6.41□□□□□ -1.38
COPB1-202ENST00000439561 LINC01600Q96MT4 127 aa6.41□□□□□ -1.38
COPB1-202ENST00000439561 CCL24O00175 119 aa6.41□□□□□ -1.38
COPB1-202ENST00000439561 PRORYQ9H606 182 aa6.41□□□□□ -1.38
COPB1-202ENST00000439561 IBA57-AS1B1ANH7 110 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 GYPEP15421 78 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 C5orf47Q569G3 176 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 Q6YL49 198 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 FLNCQ14315 2725 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms