RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
VPS50-203ENST00000436177 LINC01551Q86U37 167 aa4.83□□□□□ -1.64
VPS50-203ENST00000436177 OSTCQ9NRP0 149 aa4.83□□□□□ -1.64
VPS50-203ENST00000436177 GAS8-AS1O95177 125 aa4.82□□□□□ -1.64
VPS50-203ENST00000436177 S100A8P05109 93 aa4.82□□□□□ -1.64
VPS50-203ENST00000436177 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
VPS50-203ENST00000436177 C2orf48Q96LS8 159 aa4.82□□□□□ -1.64
VPS50-203ENST00000436177 NAT8BQ9UHF3 227 aa4.82□□□□□ -1.64
VPS50-203ENST00000436177 CSDC2Q9Y534 153 aaKnown RBP4.82□□□□□ -1.64
VPS50-203ENST00000436177 hCG_2014768A0A024R1R8 64 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 A0A1B0GW15 77 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 CKS2P33552 79 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 ODF1Q14990 250 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 ADIRFQ15847 76 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
VPS50-203ENST00000436177 Q6ZUT4 128 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 NUP35Q8NFH5 326 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 OR10D4PQ8NGN7 298 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 ORAOV1Q8WV07 137 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 IMMP2LQ96T52 175 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 TIMM21Q9BVV7 248 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
VPS50-203ENST00000436177 TGIF2-C20orf24A0A0A6YYL0 155 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 LINC00862A6NCI5 91 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 IFITM10A6NMD0 228 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 F8W036 122 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 NDUFA1O15239 70 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 TMEM241Q24JQ0 296 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 FAM74A3Q4VXF1 159 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 C1orf137Q5JT78 98 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 C20orf78Q9BR46 151 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 V9GYV3 84 aa4.8□□□□□ -1.64
VPS50-203ENST00000436177 A0A087WZ39 114 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 F8WDY8 70 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.79□□□□□ -1.64
VPS50-203ENST00000436177 RAB5AP20339 215 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 HBBP68871 147 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 FAM104BQ5XKR9 115 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 NRACQ8N912 160 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 DIRC1Q969H9 104 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 OPRPNQ99935 248 aaPredicted RBP4.79□□□□□ -1.64
VPS50-203ENST00000436177 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
VPS50-203ENST00000436177 A0A1W2PNN7 141 aa4.78□□□□□ -1.64
VPS50-203ENST00000436177 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
VPS50-203ENST00000436177 SRP19P09132 144 aaKnown RBP4.78□□□□□ -1.64
VPS50-203ENST00000436177 SRSF9Q13242 221 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS50-203ENST00000436177 RNF151Q2KHN1 245 aa4.78□□□□□ -1.64
VPS50-203ENST00000436177 MRPL51Q4U2R6 128 aaKnown RBP4.78□□□□□ -1.64
VPS50-203ENST00000436177 SMIM2Q9BVW6 85 aa4.78□□□□□ -1.64
VPS50-203ENST00000436177 NAT8Q9UHE5 227 aa4.78□□□□□ -1.64
VPS50-203ENST00000436177 SMIM27A0A1W2PRY6 76 aa4.77□□□□□ -1.65
VPS50-203ENST00000436177 D6R8Y8 96 aa4.77□□□□□ -1.65
VPS50-203ENST00000436177 TNFRSF6BO95407 300 aa4.77□□□□□ -1.65
VPS50-203ENST00000436177 PPBPP02775 128 aa4.77□□□□□ -1.65
VPS50-203ENST00000436177 IFI27P40305 119 aaPredicted RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
VPS50-203ENST00000436177 RPL23P62829 140 aaKnown RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 RPL39P62891 51 aaKnown RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 RPL32P62910 135 aaKnown RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 UBE2BP63146 152 aa4.77□□□□□ -1.65
VPS50-203ENST00000436177 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 PHF5AQ7RTV0 110 aaKnown RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 MRPL35Q9NZE8 188 aaKnown RBP4.77□□□□□ -1.65
VPS50-203ENST00000436177 TRBV24-1A0A075B6N3 115 aa4.76□□□□□ -1.65
VPS50-203ENST00000436177 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
VPS50-203ENST00000436177 PEA15Q15121 130 aa4.76□□□□□ -1.65
VPS50-203ENST00000436177 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
VPS50-203ENST00000436177 PACRGQ96M98 296 aaPredicted RBP4.76□□□□□ -1.65
VPS50-203ENST00000436177 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
VPS50-203ENST00000436177 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 M0QXV9 152 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 PRSS2P07478 247 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 UBE2D1P51668 147 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 Q6ZN92 141 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 ORMDL3Q8N138 153 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 C2orf88Q9BSF0 95 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 TNXBP22105 4242 aa4.75□□□□□ -1.65
VPS50-203ENST00000436177 H0Y9J4 135 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 NPYP01303 97 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 UNQ6190/PRO20217Q6UXQ8 127 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 TEX43Q6ZNM6 134 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 TMEM141Q96I45 108 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 PRELID3AQ96N28 172 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 SMDT1Q9H4I9 107 aa4.74□□□□□ -1.65
VPS50-203ENST00000436177 IGLV1-50A0A075B6I6 118 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 TRBV30A0A0K0K1B3 111 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 FAM168BA1KXE4 195 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 TLX1NBP0CAT3 122 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 RPL13AP40429 203 aaKnown RBP4.73□□□□□ -1.65
VPS50-203ENST00000436177 CKS1BP61024 79 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 C10orf25Q5T742 122 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 TMEM136Q6ZRR5 245 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 ATP5L2Q7Z4Y8 100 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 MAP1LC3AQ9H492 121 aa4.73□□□□□ -1.65
VPS50-203ENST00000436177 C6orf48Q9UBA6 75 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms