RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 GEMIN7Q9H840 131 aaKnown RBP15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 IGLV4-69A0A075B6H9 119 aa15.48■□□□□ 0.07
SMARCAL1-208ENST00000434435 IGLC3P0DOY3 106 aa15.48■□□□□ 0.07
SMARCAL1-208ENST00000434435 KRTAP26-1Q6PEX3 210 aa15.48■□□□□ 0.07
SMARCAL1-208ENST00000434435 MRPL35Q9NZE8 188 aaKnown RBP15.48■□□□□ 0.07
SMARCAL1-208ENST00000434435 OR10D4PQ8NGN7 298 aa15.47■□□□□ 0.07
SMARCAL1-208ENST00000434435 CHAC1Q9BUX1 264 aa15.47■□□□□ 0.07
SMARCAL1-208ENST00000434435 C20orf202A1L168 122 aa15.46■□□□□ 0.07
SMARCAL1-208ENST00000434435 PSCAO43653 123 aa15.46■□□□□ 0.07
SMARCAL1-208ENST00000434435 FOXI1Q12951 378 aa15.46■□□□□ 0.07
SMARCAL1-208ENST00000434435 LINC01545Q5VT33 79 aa15.46■□□□□ 0.07
SMARCAL1-208ENST00000434435 COX6A2Q02221 97 aa15.45■□□□□ 0.06
SMARCAL1-208ENST00000434435 Q6ZRN7 208 aaPredicted RBP15.45■□□□□ 0.06
SMARCAL1-208ENST00000434435 IGHV3OR16-9A0A0B4J2B5 98 aa15.44■□□□□ 0.06
SMARCAL1-208ENST00000434435 C11orf86A6NJI1 115 aa15.44■□□□□ 0.06
SMARCAL1-208ENST00000434435 PMCHL2Q9BQD1 86 aa15.44■□□□□ 0.06
SMARCAL1-208ENST00000434435 COX7A2LO14548 114 aa15.43■□□□□ 0.06
SMARCAL1-208ENST00000434435 DPM2O94777 84 aa15.43■□□□□ 0.06
SMARCAL1-208ENST00000434435 PLNP26678 52 aa15.43■□□□□ 0.06
SMARCAL1-208ENST00000434435 LINC00469Q8N7U9 141 aa15.43■□□□□ 0.06
SMARCAL1-208ENST00000434435 C5orf38Q86SI9 138 aa15.42■□□□□ 0.06
SMARCAL1-208ENST00000434435 IGLV5-45A0A087WSX0 123 aa15.41■□□□□ 0.06
SMARCAL1-208ENST00000434435 ZNF22P17026 224 aaPredicted RBP15.41■□□□□ 0.06
SMARCAL1-208ENST00000434435 CDKN2A-AS1Q9UH64 79 aa15.41■□□□□ 0.06
SMARCAL1-208ENST00000434435 IGKCP01834 107 aa15.4■□□□□ 0.06
SMARCAL1-208ENST00000434435 A0A087WZ39 114 aa15.39■□□□□ 0.05
SMARCAL1-208ENST00000434435 MALP21145 153 aa15.39■□□□□ 0.05
SMARCAL1-208ENST00000434435 TMEM170BQ5T4T1 132 aa15.39■□□□□ 0.05
SMARCAL1-208ENST00000434435 MAPKAPK5-AS1Q8N8E1 139 aa15.39■□□□□ 0.05
SMARCAL1-208ENST00000434435 HYDINQ4G0P3 5121 aa15.38■□□□□ 0.05
SMARCAL1-208ENST00000434435 H3BRM9 83 aa15.38■□□□□ 0.05
SMARCAL1-208ENST00000434435 AKR1D1P51857 326 aa15.38■□□□□ 0.05
SMARCAL1-208ENST00000434435 LINC01561Q8N1V8 128 aa15.38■□□□□ 0.05
SMARCAL1-208ENST00000434435 APOMO95445 188 aa15.36■□□□□ 0.05
SMARCAL1-208ENST00000434435 IGHV1-58A0A0C4DH39 117 aa15.35■□□□□ 0.05
SMARCAL1-208ENST00000434435 CFAP161Q6P656 301 aa15.35■□□□□ 0.05
SMARCAL1-208ENST00000434435 DNAH10Q8IVF4 4471 aa15.35■□□□□ 0.05
SMARCAL1-208ENST00000434435 KMT2CQ8NEZ4 4911 aaKnown RBP15.34■□□□□ 0.05
SMARCAL1-208ENST00000434435 RTL8CO15255 209 aa15.34■□□□□ 0.05
SMARCAL1-208ENST00000434435 SCGB1D1O95968 90 aa15.34■□□□□ 0.05
SMARCAL1-208ENST00000434435 USP17L23D6RBM5 183 aa15.33■□□□□ 0.04
SMARCAL1-208ENST00000434435 DNAH2Q9P225 4427 aa15.32■□□□□ 0.04
SMARCAL1-208ENST00000434435 SMIM1B2RUZ4 78 aa15.32■□□□□ 0.04
SMARCAL1-208ENST00000434435 LECT2O14960 151 aa15.32■□□□□ 0.04
SMARCAL1-208ENST00000434435 SPINK8P0C7L1 97 aa15.32■□□□□ 0.04
SMARCAL1-208ENST00000434435 C15orf56Q8N910 161 aa15.32■□□□□ 0.04
SMARCAL1-208ENST00000434435 IGHV3-64A0A075B6Q5 118 aa15.31■□□□□ 0.04
SMARCAL1-208ENST00000434435 TMEM223A0PJW6 202 aa15.31■□□□□ 0.04
SMARCAL1-208ENST00000434435 HERVK_113P61574 105 aa15.31■□□□□ 0.04
SMARCAL1-208ENST00000434435 ORAOV1Q8WV07 137 aa15.31■□□□□ 0.04
SMARCAL1-208ENST00000434435 FRAS1Q86XX4 4008 aa15.31■□□□□ 0.04
SMARCAL1-208ENST00000434435 LRCOL1A6NCL2 159 aa15.3■□□□□ 0.04
SMARCAL1-208ENST00000434435 JOSD1Q15040 202 aaPredicted RBP15.3■□□□□ 0.04
SMARCAL1-208ENST00000434435 C14orf177Q52M58 125 aa15.3■□□□□ 0.04
SMARCAL1-208ENST00000434435 ATOH7Q8N100 152 aa15.3■□□□□ 0.04
SMARCAL1-208ENST00000434435 WFDC2Q14508 124 aa15.29■□□□□ 0.04
SMARCAL1-208ENST00000434435 RYR2Q92736 4967 aa15.28■□□□□ 0.04
SMARCAL1-208ENST00000434435 A0A087WTM6 91 aa15.27■□□□□ 0.04
SMARCAL1-208ENST00000434435 GVQW2A0A096LPI5 108 aaPredicted RBP15.27■□□□□ 0.04
SMARCAL1-208ENST00000434435 TNP2Q05952 138 aa15.27■□□□□ 0.04
SMARCAL1-208ENST00000434435 SPAG11BQ08648 103 aa15.27■□□□□ 0.04
SMARCAL1-208ENST00000434435 HIGD2BQ4VC39 106 aa15.27■□□□□ 0.04
SMARCAL1-208ENST00000434435 IGLV5-39A0A0G2JS06 123 aa15.26■□□□□ 0.03
SMARCAL1-208ENST00000434435 PRSS2P07478 247 aa15.26■□□□□ 0.03
SMARCAL1-208ENST00000434435 LINC00336Q6ZUF6 198 aa15.26■□□□□ 0.03
SMARCAL1-208ENST00000434435 TOMM7Q9P0U1 55 aa15.26■□□□□ 0.03
SMARCAL1-208ENST00000434435 LOC105371267A0A1B0GV96 52 aa15.25■□□□□ 0.03
SMARCAL1-208ENST00000434435 hDV102S1A0JD36 115 aa15.25■□□□□ 0.03
SMARCAL1-208ENST00000434435 ZNF561-AS1K7EIQ3 104 aa15.25■□□□□ 0.03
SMARCAL1-208ENST00000434435 EREGO14944 169 aa15.25■□□□□ 0.03
SMARCAL1-208ENST00000434435 Q8IZM0 81 aa15.24■□□□□ 0.03
SMARCAL1-208ENST00000434435 COX7B2Q8TF08 81 aa15.24■□□□□ 0.03
SMARCAL1-208ENST00000434435 DNAH17Q9UFH2 4485 aa15.23■□□□□ 0.03
SMARCAL1-208ENST00000434435 PYY3Q5JQD4 70 aa15.23■□□□□ 0.03
SMARCAL1-208ENST00000434435 STPG4Q8N801 248 aa15.23■□□□□ 0.03
SMARCAL1-208ENST00000434435 HSBP1L1C9JCN9 74 aa15.22■□□□□ 0.03
SMARCAL1-208ENST00000434435 Q8N814 137 aa15.22■□□□□ 0.03
SMARCAL1-208ENST00000434435 E9PLD3 99 aa15.21■□□□□ 0.03
SMARCAL1-208ENST00000434435 LEPROTO15243 131 aa15.21■□□□□ 0.03
SMARCAL1-208ENST00000434435 PLEKHB2Q96CS7 222 aa15.21■□□□□ 0.03
SMARCAL1-208ENST00000434435 KIAA0087Q14695 138 aa15.2■□□□□ 0.02
SMARCAL1-208ENST00000434435 C6orf226Q5I0X4 101 aa15.2■□□□□ 0.02
SMARCAL1-208ENST00000434435 LINC00526Q96FQ7 95 aa15.2■□□□□ 0.02
SMARCAL1-208ENST00000434435 C2orf48Q96LS8 159 aa15.19■□□□□ 0.02
SMARCAL1-208ENST00000434435 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.18■□□□□ 0.02
SMARCAL1-208ENST00000434435 CXCL5P42830 114 aa15.18■□□□□ 0.02
SMARCAL1-208ENST00000434435 NTN5Q8WTR8 489 aaPredicted RBP15.18■□□□□ 0.02
SMARCAL1-208ENST00000434435 F8WDY8 70 aa15.17■□□□□ 0.02
SMARCAL1-208ENST00000434435 CKS1BP61024 79 aa15.17■□□□□ 0.02
SMARCAL1-208ENST00000434435 MAJINQ3KP22 176 aa15.17■□□□□ 0.02
SMARCAL1-208ENST00000434435 ANKRD39Q53RE8 183 aa15.17■□□□□ 0.02
SMARCAL1-208ENST00000434435 CAMK2N2Q96S95 79 aa15.17■□□□□ 0.02
SMARCAL1-208ENST00000434435 J3QQQ9 107 aa15.15■□□□□ 0.02
SMARCAL1-208ENST00000434435 NDUFA1O15239 70 aa15.15■□□□□ 0.02
SMARCAL1-208ENST00000434435 LGALS3P17931 250 aaKnown RBP15.15■□□□□ 0.02
SMARCAL1-208ENST00000434435 TSPEAR-AS2P59090 65 aa15.15■□□□□ 0.02
SMARCAL1-208ENST00000434435 VAMP8Q9BV40 100 aa15.15■□□□□ 0.02
SMARCAL1-208ENST00000434435 SYCNQ0VAF6 134 aa15.14■□□□□ 0.01
SMARCAL1-208ENST00000434435 C2orf82Q6UX34 121 aa15.14■□□□□ 0.01
SMARCAL1-208ENST00000434435 CARD19Q96LW7 228 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms