RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
TREX1-201ENST00000433541 URB1-AS1Q96HZ7 61 aa10.09□□□□□ -0.79
TREX1-201ENST00000433541 AMELXQ99217 191 aa10.09□□□□□ -0.79
TREX1-201ENST00000433541 GEMIN7Q9H840 131 aaKnown RBP10.09□□□□□ -0.79
TREX1-201ENST00000433541 HSBP1O75506 76 aa10.08□□□□□ -0.8
TREX1-201ENST00000433541 CNBPP62633 177 aaKnown RBP10.08□□□□□ -0.8
TREX1-201ENST00000433541 SEC11AP67812 179 aa10.08□□□□□ -0.8
TREX1-201ENST00000433541 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
TREX1-201ENST00000433541 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
TREX1-201ENST00000433541 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
TREX1-201ENST00000433541 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
TREX1-201ENST00000433541 HAMPP81172 84 aa10.07□□□□□ -0.8
TREX1-201ENST00000433541 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
TREX1-201ENST00000433541 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
TREX1-201ENST00000433541 DYNC1H1Q14204 4646 aaKnown RBP10.07□□□□□ -0.8
TREX1-201ENST00000433541 IGLV4-69A0A075B6H9 119 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 ATP6V1G1O75348 118 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 S100A1P23297 94 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 HERVK_113P63121 156 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 COX6A2Q02221 97 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 CAMK2N2Q96S95 79 aa10.06□□□□□ -0.8
TREX1-201ENST00000433541 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
TREX1-201ENST00000433541 ATP5LO75964 103 aa10.05□□□□□ -0.8
TREX1-201ENST00000433541 PMVKQ15126 192 aa10.05□□□□□ -0.8
TREX1-201ENST00000433541 OR10D4PQ8NGN7 298 aa10.05□□□□□ -0.8
TREX1-201ENST00000433541 PACRGQ96M98 296 aaPredicted RBP10.05□□□□□ -0.8
TREX1-201ENST00000433541 KIAA1109Q2LD37 5005 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 DNAH5Q8TE73 4624 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 A0A087WZ39 114 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 A0A096LNJ9 63 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 SYCNQ0VAF6 134 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 LINC00469Q8N7U9 141 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
TREX1-201ENST00000433541 SLPIP03973 132 aa10.03□□□□□ -0.8
TREX1-201ENST00000433541 PRSS2P07478 247 aa10.03□□□□□ -0.8
TREX1-201ENST00000433541 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
TREX1-201ENST00000433541 TOMM7Q9P0U1 55 aa10.03□□□□□ -0.8
TREX1-201ENST00000433541 SERF1AO75920 110 aa10.02□□□□□ -0.81
TREX1-201ENST00000433541 PDZD11Q5EBL8 140 aa10.02□□□□□ -0.81
TREX1-201ENST00000433541 FAM19A2Q8N3H0 131 aa10.02□□□□□ -0.81
TREX1-201ENST00000433541 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
TREX1-201ENST00000433541 XGP55808 180 aa10.01□□□□□ -0.81
TREX1-201ENST00000433541 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
TREX1-201ENST00000433541 TINCRA0A1B0GVN0 87 aa10□□□□□ -0.81
TREX1-201ENST00000433541 NDUFA1O15239 70 aa10□□□□□ -0.81
TREX1-201ENST00000433541 Q6ZRU5 148 aa10□□□□□ -0.81
TREX1-201ENST00000433541 FAM19A3Q7Z5A8 133 aa10□□□□□ -0.81
TREX1-201ENST00000433541 C2orf48Q96LS8 159 aa10□□□□□ -0.81
TREX1-201ENST00000433541 LRP1BQ9NZR2 4599 aa10□□□□□ -0.81
TREX1-201ENST00000433541 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
TREX1-201ENST00000433541 H0Y8G0 127 aa9.99□□□□□ -0.81
TREX1-201ENST00000433541 SMR3BP02814 79 aaPredicted RBP9.99□□□□□ -0.81
TREX1-201ENST00000433541 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
TREX1-201ENST00000433541 Q6ZSA8 131 aa9.99□□□□□ -0.81
TREX1-201ENST00000433541 IFI27L1Q96BM0 104 aa9.99□□□□□ -0.81
TREX1-201ENST00000433541 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
TREX1-201ENST00000433541 H3BRM9 83 aa9.98□□□□□ -0.81
TREX1-201ENST00000433541 CKS1BP61024 79 aa9.98□□□□□ -0.81
TREX1-201ENST00000433541 SCXQ7RTU7 201 aa9.98□□□□□ -0.81
TREX1-201ENST00000433541 LINC01561Q8N1V8 128 aa9.98□□□□□ -0.81
TREX1-201ENST00000433541 LEPROTL1O95214 131 aa9.97□□□□□ -0.81
TREX1-201ENST00000433541 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
TREX1-201ENST00000433541 FABP4P15090 132 aa9.97□□□□□ -0.81
TREX1-201ENST00000433541 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
TREX1-201ENST00000433541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.97□□□□□ -0.81
TREX1-201ENST00000433541 RYR1P21817 5038 aa9.96□□□□□ -0.81
TREX1-201ENST00000433541 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 F8WDY8 70 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BKO60814 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BJP06899 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 SPINK8P0C7L1 97 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BOP23527 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BBP33778 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BDP58876 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BCP62807 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST2H2BEQ16778 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 MAJINQ3KP22 176 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BHQ93079 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
TREX1-201ENST00000433541 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
TREX1-201ENST00000433541 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
TREX1-201ENST00000433541 UNQ6190/PRO20217Q6UXQ8 127 aa9.95□□□□□ -0.82
TREX1-201ENST00000433541 HSPB8Q9UJY1 196 aa9.95□□□□□ -0.82
TREX1-201ENST00000433541 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 IGLC3P0DOY3 106 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 LINC00310P59036 64 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 Q8IZM0 81 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 Q8N1X5 172 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 CIRBP-AS1Q8TBR5 109 aa9.94□□□□□ -0.82
TREX1-201ENST00000433541 A0A096LNI7 61 aa9.93□□□□□ -0.82
TREX1-201ENST00000433541 SMIM1B2RUZ4 78 aa9.93□□□□□ -0.82
TREX1-201ENST00000433541 EPM2AB3EWF7 344 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms