RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 UBE2AP49459 152 aa8.93□□□□□ -0.98
NUP50-209ENST00000432340 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
NUP50-209ENST00000432340 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
NUP50-209ENST00000432340 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
NUP50-209ENST00000432340 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
NUP50-209ENST00000432340 CENPWQ5EE01 88 aa8.92□□□□□ -0.98
NUP50-209ENST00000432340 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
NUP50-209ENST00000432340 M0R2T5 61 aa8.91□□□□□ -0.98
NUP50-209ENST00000432340 RNASE13Q5GAN3 156 aaKnown RBP8.91□□□□□ -0.98
NUP50-209ENST00000432340 SFT2D1Q8WV19 159 aa8.91□□□□□ -0.98
NUP50-209ENST00000432340 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
NUP50-209ENST00000432340 TGIF2-C20orf24A0A0A6YYL0 155 aa8.9□□□□□ -0.98
NUP50-209ENST00000432340 VCYO14598 125 aa8.9□□□□□ -0.98
NUP50-209ENST00000432340 GNG4P50150 75 aa8.9□□□□□ -0.98
NUP50-209ENST00000432340 KCNRGQ8N5I3 272 aa8.9□□□□□ -0.98
NUP50-209ENST00000432340 DAND5Q8N907 189 aa8.9□□□□□ -0.98
NUP50-209ENST00000432340 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
NUP50-209ENST00000432340 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
NUP50-209ENST00000432340 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
NUP50-209ENST00000432340 KIR2DL4Q99706 377 aa8.89□□□□□ -0.99
NUP50-209ENST00000432340 FOXA3P55318 350 aaPredicted RBP8.88□□□□□ -0.99
NUP50-209ENST00000432340 Q6ZUT4 128 aa8.88□□□□□ -0.99
NUP50-209ENST00000432340 PPP1R17O96001 155 aa8.87□□□□□ -0.99
NUP50-209ENST00000432340 CCL20P78556 96 aa8.87□□□□□ -0.99
NUP50-209ENST00000432340 C11orf52Q96A22 123 aa8.87□□□□□ -0.99
NUP50-209ENST00000432340 BATF3Q9NR55 127 aa8.87□□□□□ -0.99
NUP50-209ENST00000432340 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
NUP50-209ENST00000432340 MBD3L1Q8WWY6 194 aa8.85□□□□□ -0.99
NUP50-209ENST00000432340 UMAD1C9J7I0 102 aa8.84□□□□□ -0.99
NUP50-209ENST00000432340 HBBP68871 147 aa8.84□□□□□ -0.99
NUP50-209ENST00000432340 FAM19A2Q8N3H0 131 aa8.84□□□□□ -0.99
NUP50-209ENST00000432340 BORCS7Q96B45 105 aa8.84□□□□□ -0.99
NUP50-209ENST00000432340 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
NUP50-209ENST00000432340 TCAPO15273 167 aa8.83□□□□□ -1
NUP50-209ENST00000432340 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
NUP50-209ENST00000432340 XP32Q5T750 250 aa8.83□□□□□ -1
NUP50-209ENST00000432340 C2orf82Q6UX34 121 aa8.83□□□□□ -1
NUP50-209ENST00000432340 KRTAP13-1Q8IUC0 172 aa8.83□□□□□ -1
NUP50-209ENST00000432340 XAGE1AQ9HD64 81 aa8.83□□□□□ -1
NUP50-209ENST00000432340 A0A1B0GV50 99 aa8.82□□□□□ -1
NUP50-209ENST00000432340 IFITM10A6NMD0 228 aa8.82□□□□□ -1
NUP50-209ENST00000432340 PRSS2P07478 247 aa8.82□□□□□ -1
NUP50-209ENST00000432340 CKS1BP61024 79 aa8.82□□□□□ -1
NUP50-209ENST00000432340 NUDT10Q8NFP7 164 aa8.82□□□□□ -1
NUP50-209ENST00000432340 FAM213BQ8TBF2 198 aa8.82□□□□□ -1
NUP50-209ENST00000432340 NUDT11Q96G61 164 aa8.82□□□□□ -1
NUP50-209ENST00000432340 LINC00469Q8N7U9 141 aa8.81□□□□□ -1
NUP50-209ENST00000432340 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
NUP50-209ENST00000432340 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
NUP50-209ENST00000432340 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
NUP50-209ENST00000432340 SPINK1P00995 79 aa8.8□□□□□ -1
NUP50-209ENST00000432340 LINC00167Q96N53 147 aa8.8□□□□□ -1
NUP50-209ENST00000432340 PPP1R2P9O14990 202 aa8.79□□□□□ -1
NUP50-209ENST00000432340 H2AFB1P0C5Y9 115 aa8.79□□□□□ -1
NUP50-209ENST00000432340 SUMO2P61956 95 aaKnown RBP8.79□□□□□ -1
NUP50-209ENST00000432340 MRPS36P82909 103 aaKnown RBP8.79□□□□□ -1
NUP50-209ENST00000432340 LINC01561Q8N1V8 128 aa8.79□□□□□ -1
NUP50-209ENST00000432340 PDE6DO43924 150 aa8.78□□□□□ -1
NUP50-209ENST00000432340 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
NUP50-209ENST00000432340 TRBV20OR9-2A0A075B6H5 130 aa8.77□□□□□ -1.01
NUP50-209ENST00000432340 C3orf22Q8N5N4 141 aa8.77□□□□□ -1.01
NUP50-209ENST00000432340 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
NUP50-209ENST00000432340 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
NUP50-209ENST00000432340 C6orf226Q5I0X4 101 aa8.76□□□□□ -1.01
NUP50-209ENST00000432340 GNG13Q9P2W3 67 aa8.76□□□□□ -1.01
NUP50-209ENST00000432340 A8MWL6 223 aa8.75□□□□□ -1.01
NUP50-209ENST00000432340 TEX46H3BTG2 121 aa8.75□□□□□ -1.01
NUP50-209ENST00000432340 GIPP09681 153 aaPredicted RBP8.75□□□□□ -1.01
NUP50-209ENST00000432340 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
NUP50-209ENST00000432340 NKAPP1Q8N9T2 125 aa8.75□□□□□ -1.01
NUP50-209ENST00000432340 MED9Q9NWA0 146 aa8.75□□□□□ -1.01
NUP50-209ENST00000432340 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
NUP50-209ENST00000432340 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
NUP50-209ENST00000432340 RAB4AP20338 218 aa8.73□□□□□ -1.01
NUP50-209ENST00000432340 Q5BKY6 102 aa8.73□□□□□ -1.01
NUP50-209ENST00000432340 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
NUP50-209ENST00000432340 Q6ZN92 141 aa8.72□□□□□ -1.01
NUP50-209ENST00000432340 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
NUP50-209ENST00000432340 PLEKHB2Q96CS7 222 aa8.72□□□□□ -1.01
NUP50-209ENST00000432340 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
NUP50-209ENST00000432340 A0A1B0GUT8 65 aa8.71□□□□□ -1.02
NUP50-209ENST00000432340 PRLHP81277 87 aa8.71□□□□□ -1.02
NUP50-209ENST00000432340 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.02
NUP50-209ENST00000432340 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 F8VRH5 84 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
NUP50-209ENST00000432340 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
NUP50-209ENST00000432340 RPL39P62891 51 aaKnown RBP8.7□□□□□ -1.02
NUP50-209ENST00000432340 CBLN2Q8IUK8 224 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 AMN1Q8IY45 258 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 Q8IZM0 81 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 Q8NBF4 154 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 C20orf78Q9BR46 151 aa8.7□□□□□ -1.02
NUP50-209ENST00000432340 SLC25A20O43772 301 aa8.69□□□□□ -1.02
NUP50-209ENST00000432340 IFI27P40305 119 aaPredicted RBP8.69□□□□□ -1.02
NUP50-209ENST00000432340 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
NUP50-209ENST00000432340 CFC1P0CG37 223 aa8.68□□□□□ -1.02
NUP50-209ENST00000432340 CXCL5P42830 114 aa8.68□□□□□ -1.02
NUP50-209ENST00000432340 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
NUP50-209ENST00000432340 CT83Q5H943 113 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms