RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
RPL28-204ENST00000431533 IMMP2LQ96T52 175 aa9.71□□□□□ -0.86
RPL28-204ENST00000431533 SEC11CQ9BY50 192 aa9.71□□□□□ -0.86
RPL28-204ENST00000431533 APOMO95445 188 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 KIAA1644Q3SXP7 199 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 STPG4Q8N801 248 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 Q8N8P6 123 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
RPL28-204ENST00000431533 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
RPL28-204ENST00000431533 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
RPL28-204ENST00000431533 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 PRSS47A8MTI9 375 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 S100PP25815 95 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 CYSLTR1Q9Y271 337 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
RPL28-204ENST00000431533 GAGE2BQ13066 116 aa9.67□□□□□ -0.86
RPL28-204ENST00000431533 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
RPL28-204ENST00000431533 C2orf66Q6UXQ4 117 aa9.67□□□□□ -0.86
RPL28-204ENST00000431533 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
RPL28-204ENST00000431533 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
RPL28-204ENST00000431533 TRAV9-1A0A075B6T8 112 aa9.66□□□□□ -0.86
RPL28-204ENST00000431533 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
RPL28-204ENST00000431533 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
RPL28-204ENST00000431533 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
RPL28-204ENST00000431533 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
RPL28-204ENST00000431533 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.86
RPL28-204ENST00000431533 Q6ZN92 141 aa9.65□□□□□ -0.86
RPL28-204ENST00000431533 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
RPL28-204ENST00000431533 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
RPL28-204ENST00000431533 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
RPL28-204ENST00000431533 NXT2Q9NPJ8 142 aaKnown RBP9.65□□□□□ -0.86
RPL28-204ENST00000431533 RPS10P5Q9NQ39 176 aa9.65□□□□□ -0.86
RPL28-204ENST00000431533 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
RPL28-204ENST00000431533 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
RPL28-204ENST00000431533 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
RPL28-204ENST00000431533 UBR4Q5T4S7 5183 aa9.64□□□□□ -0.87
RPL28-204ENST00000431533 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
RPL28-204ENST00000431533 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
RPL28-204ENST00000431533 K7EMI3 77 aa9.62□□□□□ -0.87
RPL28-204ENST00000431533 UBE2D1P51668 147 aa9.62□□□□□ -0.87
RPL28-204ENST00000431533 VCX2Q9H322 139 aa9.62□□□□□ -0.87
RPL28-204ENST00000431533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
RPL28-204ENST00000431533 RHEBQ15382 184 aa9.61□□□□□ -0.87
RPL28-204ENST00000431533 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
RPL28-204ENST00000431533 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
RPL28-204ENST00000431533 GNB1LQ9BYB4 327 aa9.61□□□□□ -0.87
RPL28-204ENST00000431533 CARHSP1Q9Y2V2 147 aaKnown RBP9.61□□□□□ -0.87
RPL28-204ENST00000431533 A0A087WZ39 114 aa9.6□□□□□ -0.87
RPL28-204ENST00000431533 NDUFA1O15239 70 aa9.6□□□□□ -0.87
RPL28-204ENST00000431533 FABP9Q0Z7S8 132 aa9.6□□□□□ -0.87
RPL28-204ENST00000431533 IGIPA6NJ69 53 aa9.59□□□□□ -0.87
RPL28-204ENST00000431533 G0S2P27469 103 aa9.59□□□□□ -0.87
RPL28-204ENST00000431533 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
RPL28-204ENST00000431533 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
RPL28-204ENST00000431533 LINC01600Q96MT4 127 aa9.59□□□□□ -0.87
RPL28-204ENST00000431533 AMELXQ99217 191 aa9.59□□□□□ -0.87
RPL28-204ENST00000431533 ALKBH7Q9BT30 221 aaPredicted RBP9.59□□□□□ -0.87
RPL28-204ENST00000431533 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
RPL28-204ENST00000431533 APOC3P02656 99 aa9.58□□□□□ -0.88
RPL28-204ENST00000431533 COX19Q49B96 90 aa9.58□□□□□ -0.88
RPL28-204ENST00000431533 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
RPL28-204ENST00000431533 TOMM6Q96B49 74 aa9.58□□□□□ -0.88
RPL28-204ENST00000431533 MRPL35Q9NZE8 188 aaKnown RBP9.58□□□□□ -0.88
RPL28-204ENST00000431533 MT-ND6P03923 174 aa9.57□□□□□ -0.88
RPL28-204ENST00000431533 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
RPL28-204ENST00000431533 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
RPL28-204ENST00000431533 PAPPA-AS1Q5QFB9 102 aa9.57□□□□□ -0.88
RPL28-204ENST00000431533 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
RPL28-204ENST00000431533 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
RPL28-204ENST00000431533 C6orf48Q9UBA6 75 aa9.57□□□□□ -0.88
RPL28-204ENST00000431533 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 F8WDY8 70 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 NPSP0C0P6 89 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
RPL28-204ENST00000431533 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
RPL28-204ENST00000431533 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
RPL28-204ENST00000431533 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
RPL28-204ENST00000431533 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
RPL28-204ENST00000431533 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
RPL28-204ENST00000431533 PRSS2P07478 247 aa9.54□□□□□ -0.88
RPL28-204ENST00000431533 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
RPL28-204ENST00000431533 ERASQ7Z444 233 aa9.54□□□□□ -0.88
RPL28-204ENST00000431533 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
RPL28-204ENST00000431533 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
RPL28-204ENST00000431533 SNAPINO95295 136 aa9.53□□□□□ -0.88
RPL28-204ENST00000431533 HERVK_113P63121 156 aa9.53□□□□□ -0.88
RPL28-204ENST00000431533 Q6ZRP5 223 aa9.53□□□□□ -0.88
RPL28-204ENST00000431533 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
RPL28-204ENST00000431533 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
RPL28-204ENST00000431533 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
RPL28-204ENST00000431533 SEC11AP67812 179 aa9.52□□□□□ -0.89
RPL28-204ENST00000431533 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms