RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 A0A0J9YXV3 536 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 INMT-MINDY4F8WBC2 141 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 H7C1H1 209 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 UBE2L6O14933 153 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 SH2D1AO60880 128 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 NDUFS6O75380 124 aaKnown RBP2.07□□□□□ -2.08
PTPN4-204ENST00000431283 S100A9P06702 114 aaKnown RBP2.07□□□□□ -2.08
PTPN4-204ENST00000431283 ATP6V0CP27449 155 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 SULT1A2P50226 295 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 RAB5CP51148 216 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 UBE2G2P60604 165 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 PRR3P79522 188 aaKnown RBP2.07□□□□□ -2.08
PTPN4-204ENST00000431283 COX6A2Q02221 97 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 IQCJQ1A5X6 159 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 SPANXN1Q5VSR9 72 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 Q86TA4 180 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 STOML3Q8TAV4 291 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 SPACA4Q8TDM5 124 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 S100ZQ8WXG8 99 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 TCEAL7Q9BRU2 100 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
PTPN4-204ENST00000431283 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 A0A0U1RQV1 116 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 CTXND1A0A1B0GTU2 59 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 LTAP01374 205 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 AKR1C3P42330 323 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 CRIP1P50238 77 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 DEFA1P59665 94 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 DEFA3P59666 94 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 AKR1C8PQ5T2L2 129 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 LINC00299Q6ZSB3 139 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 INO80EQ8NBZ0 244 aaPredicted RBP2.06□□□□□ -2.08
PTPN4-204ENST00000431283 LYPD6BQ8NI32 183 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 AP1S3Q96PC3 154 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 AQP10Q96PS8 301 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 TMEM243Q9BU79 118 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 VAX2Q9UIW0 290 aa2.06□□□□□ -2.08
PTPN4-204ENST00000431283 IGKV3OR2-268A0A0C4DH90 116 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 MUC21A0A0G2JKD1 596 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 MUC21A0A140T8X8 626 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 UPK1BO75841 260 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 MGPP08493 103 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 CXCL1P09341 107 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 OR5AL1P0C617 328 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 COTL1Q14019 142 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 AMMECR1LQ6DCA0 310 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 KRTAP26-1Q6PEX3 210 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 NTM-AS1Q6ZSK4 140 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 BAGE2Q86Y30 109 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 OR10AG1Q8NH19 301 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 MARVELD1Q9BSK0 173 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 TPPP3Q9BW30 176 aa2.05□□□□□ -2.08
PTPN4-204ENST00000431283 TRAV26-2A0A0B4J265 109 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 XKRY2A2RUG3 117 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 MAP1LC3B2A6NCE7 125 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 M0QY20 66 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 PFDN1O60925 122 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 TRGC1P0CF51 173 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 NKX2-5P52952 324 aaPredicted RBP2.04□□□□□ -2.08
PTPN4-204ENST00000431283 RPS20P60866 119 aaKnown RBP2.04□□□□□ -2.08
PTPN4-204ENST00000431283 RASL11AQ6T310 242 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 Q6ZN92 141 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 ZNF664Q8N3J9 261 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 ISOC2Q96AB3 205 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 MAP1LC3BQ9GZQ8 125 aa2.04□□□□□ -2.08
PTPN4-204ENST00000431283 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 FXYD6-FXYD2A0A087WZ82 144 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 A0A096LNI7 61 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
PTPN4-204ENST00000431283 IGHV1-58A0A0C4DH39 117 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 F2Z2F3 143 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 MT-ND6P03923 174 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 XCL1P47992 114 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 ZNF726P1Q15940 193 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 RPL7L1Q6DKI1 246 aaKnown RBP2.03□□□□□ -2.08
PTPN4-204ENST00000431283 RNASEKQ6P5S7 137 aaKnown RBP2.03□□□□□ -2.08
PTPN4-204ENST00000431283 C15orf56Q8N910 161 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 FER1L6-AS1Q8NA97 138 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 OR2D3Q8NGH3 330 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 BTF3L4Q96K17 158 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 CARD19Q96LW7 228 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 MED28Q9H204 178 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 NIT2Q9NQR4 276 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 BIN3Q9NQY0 253 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
PTPN4-204ENST00000431283 TRAV1-1A0A0B4J248 108 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 LOC107984640A0A0U1RRK4 108 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 NCR2O95944 276 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 IFNA1P01562 189 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 APCSP02743 223 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 FGF6P10767 208 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 ZNF25P17030 456 aaPredicted RBP2.02□□□□□ -2.09
PTPN4-204ENST00000431283 EIF5AP63241 154 aaKnown RBP2.02□□□□□ -2.09
PTPN4-204ENST00000431283 SYCNQ0VAF6 134 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 KIAA0087Q14695 138 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 SS18Q15532 418 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 C1orf137Q5JT78 98 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 EIF5AL1Q6IS14 154 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms