RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TET2Q6N021 2002 aaPredicted RBP3.22□□□□□ -1.89
LRRK2-204ENST00000430804 MRPS36P82909 103 aaKnown RBP3.22□□□□□ -1.89
LRRK2-204ENST00000430804 C9orf163Q8N9P6 203 aa3.22□□□□□ -1.89
LRRK2-204ENST00000430804 DYSFO75923 2080 aa3.22□□□□□ -1.89
LRRK2-204ENST00000430804 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.89
LRRK2-204ENST00000430804 FHL2Q14192 279 aa3.21□□□□□ -1.89
LRRK2-204ENST00000430804 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.89
LRRK2-204ENST00000430804 COL4A3Q01955 1670 aa3.21□□□□□ -1.89
LRRK2-204ENST00000430804 FN1P02751 2386 aaKnown RBP3.21□□□□□ -1.89
LRRK2-204ENST00000430804 ESRGQ1W209 222 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 C20orf173Q96LM9 149 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 PYGO1Q9Y3Y4 419 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 C18orf32Q8TCD1 76 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 C10orf142B7Z368 130 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 LINC00528Q8N1L1 170 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 LINC01561Q8N1V8 128 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 PPDPFLQ8WWR9 84 aa3.21□□□□□ -1.9
LRRK2-204ENST00000430804 GDF5OSQ5U4N7 250 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 HELZP42694 1942 aaKnown RBP3.2□□□□□ -1.9
LRRK2-204ENST00000430804 A0A1B0GUV1 79 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 KLLNB2CW77 178 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 LINC00476Q8WZB0 136 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 EML6Q6ZMW3 1958 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 A0A1W2PPR1 153 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 M0QY20 66 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 ZNF726P1Q15940 193 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 KRTAP21-3Q3LHN1 58 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 Q8NBF4 154 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 C2orf16Q68DN1 1984 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 C6orf99Q4VX62 202 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 LINC00526Q96FQ7 95 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 PHF3Q92576 2039 aaKnown RBP3.2□□□□□ -1.9
LRRK2-204ENST00000430804 A0A0B4J2C4 111 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 TRBV6-5A0A0K0K1A5 114 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 TM2D3Q9BRN9 247 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 PLXNA2O75051 1894 aa3.2□□□□□ -1.9
LRRK2-204ENST00000430804 CASC10Q5T4H9 136 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 MED12LQ86YW9 2145 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
LRRK2-204ENST00000430804 ZNF575Q86XF7 245 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 CYYR1Q96J86 154 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 CDKN2A-AS1Q9UH64 79 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 PTH2Q96A98 100 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 PSORS1C2Q9UIG4 136 aa3.19□□□□□ -1.9
LRRK2-204ENST00000430804 ANAPC1Q9H1A4 1944 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 NOTCH4Q99466 2003 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 E9PLD3 99 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 LCE6AA0A183 80 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 IGLC3P0DOY3 106 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 WFDC13Q8IUB5 93 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 SMCR5Q8TEV8 140 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 FAM167A-AS1Q96KT0 104 aa3.18□□□□□ -1.9
LRRK2-204ENST00000430804 ATOX1O00244 68 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 MOBPQ13875 183 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 C22orf24Q9Y442 160 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 LINC00588Q9Y4M8 146 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 TAX1BP3O14907 124 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 ATP5EP2Q5VTU8 51 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 C11orf1Q9H5F2 150 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 CDC42SE2Q9NRR3 84 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 CELA1Q9UNI1 258 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 IGLV4-3A0A075B6K6 122 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 OXTP01178 125 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 Q6ZQY7 126 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 USP9XQ93008 2570 aaPredicted RBP3.17□□□□□ -1.9
LRRK2-204ENST00000430804 COX8AP10176 69 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 Q6ZSA8 131 aa3.17□□□□□ -1.9
LRRK2-204ENST00000430804 TNRC6AQ8NDV7 1962 aaKnown RBP3.16□□□□□ -1.9
LRRK2-204ENST00000430804 F8P00451 2351 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 TRBV27A0A0K0K1C4 114 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 TIMM17BO60830 172 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 SRSF3P84103 164 aaKnown RBP3.16□□□□□ -1.9
LRRK2-204ENST00000430804 ACYP2P14621 99 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
LRRK2-204ENST00000430804 A0A087WTM6 91 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 H3BT86 120 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 HIST3H2BBQ8N257 126 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 IGKV2-30P06310 120 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 RETNLBQ9BQ08 111 aa3.16□□□□□ -1.9
LRRK2-204ENST00000430804 DOCK11Q5JSL3 2073 aa3.15□□□□□ -1.9
LRRK2-204ENST00000430804 F8W1H4 67 aa3.15□□□□□ -1.9
LRRK2-204ENST00000430804 BCE1O60756 84 aa3.15□□□□□ -1.9
LRRK2-204ENST00000430804 MRPL52Q86TS9 123 aaKnown RBP3.15□□□□□ -1.9
LRRK2-204ENST00000430804 C19orf73Q9NVV2 129 aa3.15□□□□□ -1.9
LRRK2-204ENST00000430804 SEC61BP60468 96 aaKnown RBP3.15□□□□□ -1.91
LRRK2-204ENST00000430804 UBE2V1Q13404 147 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 IGLV1-50A0A075B6I6 118 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 CLEC2BQ92478 149 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 DNAH10OSP0CZ25 163 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 BTCP35070 178 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 LINC00313P59037 77 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 V9GYY9 64 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 DENND4CQ5VZ89 1909 aa3.15□□□□□ -1.91
LRRK2-204ENST00000430804 Q6ZPA2 131 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms