RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 CD164L2Q6UWJ8 174 aa12.88□□□□□ -0.35
PTCD1-203ENST00000430029 SPATA12Q7Z6I5 190 aa12.87□□□□□ -0.35
PTCD1-203ENST00000430029 COX11Q9Y6N1 276 aa12.87□□□□□ -0.35
PTCD1-203ENST00000430029 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
PTCD1-203ENST00000430029 ODF1Q14990 250 aa12.86□□□□□ -0.35
PTCD1-203ENST00000430029 MAP1LC3CQ9BXW4 147 aa12.86□□□□□ -0.35
PTCD1-203ENST00000430029 IGHV3OR16-9A0A0B4J2B5 98 aa12.85□□□□□ -0.35
PTCD1-203ENST00000430029 C3orf79P0CE67 100 aa12.85□□□□□ -0.35
PTCD1-203ENST00000430029 CHTOPQ9Y3Y2 248 aaKnown RBP12.85□□□□□ -0.35
PTCD1-203ENST00000430029 TINCRA0A1B0GVN0 87 aa12.84□□□□□ -0.35
PTCD1-203ENST00000430029 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
PTCD1-203ENST00000430029 PSCAO43653 123 aa12.84□□□□□ -0.35
PTCD1-203ENST00000430029 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
PTCD1-203ENST00000430029 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
PTCD1-203ENST00000430029 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
PTCD1-203ENST00000430029 WFDC2Q14508 124 aa12.83□□□□□ -0.36
PTCD1-203ENST00000430029 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 F8VRH5 84 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 KRTDAPP60985 99 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 HERVK_113P63121 156 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 SEC11AP67812 179 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
PTCD1-203ENST00000430029 IGLV5-45A0A087WSX0 123 aa12.81□□□□□ -0.36
PTCD1-203ENST00000430029 TNP2Q05952 138 aa12.81□□□□□ -0.36
PTCD1-203ENST00000430029 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
PTCD1-203ENST00000430029 GEMIN7Q9H840 131 aaKnown RBP12.81□□□□□ -0.36
PTCD1-203ENST00000430029 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
PTCD1-203ENST00000430029 FAT2Q9NYQ8 4349 aa12.8□□□□□ -0.36
PTCD1-203ENST00000430029 COX7A2LO14548 114 aa12.8□□□□□ -0.36
PTCD1-203ENST00000430029 LECT2O14960 151 aa12.8□□□□□ -0.36
PTCD1-203ENST00000430029 PET117Q6UWS5 81 aa12.8□□□□□ -0.36
PTCD1-203ENST00000430029 A0A087WZ39 114 aa12.79□□□□□ -0.36
PTCD1-203ENST00000430029 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-203ENST00000430029 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
PTCD1-203ENST00000430029 LINC00469Q8N7U9 141 aa12.79□□□□□ -0.36
PTCD1-203ENST00000430029 A0A087WTM6 91 aa12.78□□□□□ -0.36
PTCD1-203ENST00000430029 USP17L23D6RBM5 183 aa12.78□□□□□ -0.36
PTCD1-203ENST00000430029 C15orf56Q8N910 161 aa12.78□□□□□ -0.36
PTCD1-203ENST00000430029 OR10D4PQ8NGN7 298 aa12.77□□□□□ -0.37
PTCD1-203ENST00000430029 MALP21145 153 aa12.75□□□□□ -0.37
PTCD1-203ENST00000430029 LINC01561Q8N1V8 128 aa12.75□□□□□ -0.37
PTCD1-203ENST00000430029 IGHV1-58A0A0C4DH39 117 aa12.74□□□□□ -0.37
PTCD1-203ENST00000430029 DPM2O94777 84 aa12.74□□□□□ -0.37
PTCD1-203ENST00000430029 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
PTCD1-203ENST00000430029 DNAH11Q96DT5 4516 aa12.74□□□□□ -0.37
PTCD1-203ENST00000430029 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
PTCD1-203ENST00000430029 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
PTCD1-203ENST00000430029 IGKCP01834 107 aa12.73□□□□□ -0.37
PTCD1-203ENST00000430029 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
PTCD1-203ENST00000430029 HIGD2BQ4VC39 106 aa12.73□□□□□ -0.37
PTCD1-203ENST00000430029 LINC00336Q6ZUF6 198 aa12.73□□□□□ -0.37
PTCD1-203ENST00000430029 PLNP26678 52 aa12.72□□□□□ -0.37
PTCD1-203ENST00000430029 CFAP161Q6P656 301 aa12.72□□□□□ -0.37
PTCD1-203ENST00000430029 GVQW2A0A096LPI5 108 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-203ENST00000430029 H3BRM9 83 aa12.71□□□□□ -0.37
PTCD1-203ENST00000430029 APOMO95445 188 aa12.71□□□□□ -0.37
PTCD1-203ENST00000430029 Q8N814 137 aa12.71□□□□□ -0.37
PTCD1-203ENST00000430029 ORAOV1Q8WV07 137 aa12.71□□□□□ -0.37
PTCD1-203ENST00000430029 LINC00526Q96FQ7 95 aa12.71□□□□□ -0.37
PTCD1-203ENST00000430029 TMEM223A0PJW6 202 aa12.7□□□□□ -0.38
PTCD1-203ENST00000430029 C20orf202A1L168 122 aa12.69□□□□□ -0.38
PTCD1-203ENST00000430029 KIAA0087Q14695 138 aa12.69□□□□□ -0.38
PTCD1-203ENST00000430029 IGLV5-39A0A0G2JS06 123 aa12.68□□□□□ -0.38
PTCD1-203ENST00000430029 hDV102S1A0JD36 115 aa12.68□□□□□ -0.38
PTCD1-203ENST00000430029 SPAG11BQ08648 103 aa12.68□□□□□ -0.38
PTCD1-203ENST00000430029 C14orf177Q52M58 125 aa12.68□□□□□ -0.38
PTCD1-203ENST00000430029 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-203ENST00000430029 SLPIP03973 132 aa12.67□□□□□ -0.38
PTCD1-203ENST00000430029 ATOH7Q8N100 152 aa12.67□□□□□ -0.38
PTCD1-203ENST00000430029 BIRC6Q9NR09 4857 aa12.67□□□□□ -0.38
PTCD1-203ENST00000430029 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
PTCD1-203ENST00000430029 FUSP35637 526 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTCD1-203ENST00000430029 NTN5Q8WTR8 489 aaPredicted RBP12.66□□□□□ -0.38
PTCD1-203ENST00000430029 TOMM7Q9P0U1 55 aa12.66□□□□□ -0.38
PTCD1-203ENST00000430029 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
PTCD1-203ENST00000430029 A0A1B0GVY2 172 aa12.65□□□□□ -0.38
PTCD1-203ENST00000430029 ZNF561-AS1K7EIQ3 104 aa12.65□□□□□ -0.38
PTCD1-203ENST00000430029 EREGO14944 169 aa12.65□□□□□ -0.38
PTCD1-203ENST00000430029 PKD1P98161 4303 aa12.65□□□□□ -0.38
PTCD1-203ENST00000430029 SCGB1D1O95968 90 aa12.64□□□□□ -0.39
PTCD1-203ENST00000430029 KRTAP10-2P60368 255 aa12.64□□□□□ -0.39
PTCD1-203ENST00000430029 Q8IZM0 81 aa12.64□□□□□ -0.39
PTCD1-203ENST00000430029 STPG4Q8N801 248 aa12.64□□□□□ -0.39
PTCD1-203ENST00000430029 COX7B2Q8TF08 81 aa12.64□□□□□ -0.39
PTCD1-203ENST00000430029 DNAH5Q8TE73 4624 aa12.62□□□□□ -0.39
PTCD1-203ENST00000430029 JOSD1Q15040 202 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-203ENST00000430029 C2orf48Q96LS8 159 aa12.62□□□□□ -0.39
PTCD1-203ENST00000430029 PRSS2P07478 247 aa12.61□□□□□ -0.39
PTCD1-203ENST00000430029 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
PTCD1-203ENST00000430029 AKR1D1P51857 326 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 TSPEAR-AS2P59090 65 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 HERVK_113P61574 105 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 CNBPP62633 177 aaKnown RBP12.6□□□□□ -0.39
PTCD1-203ENST00000430029 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 C6orf226Q5I0X4 101 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 C10orf25Q5T742 122 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 CAMK2N2Q96S95 79 aa12.6□□□□□ -0.39
PTCD1-203ENST00000430029 E9PLD3 99 aa12.59□□□□□ -0.39
PTCD1-203ENST00000430029 SYCNQ0VAF6 134 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms