RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DNAH11Q96DT5 4516 aa9.54□□□□□ -0.88
SGCE-204ENST00000428696 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
SGCE-204ENST00000428696 TIMM17AQ99595 171 aa9.54□□□□□ -0.88
SGCE-204ENST00000428696 LINC01549A6NIU2 74 aa9.53□□□□□ -0.88
SGCE-204ENST00000428696 HSBP1O75506 76 aa9.53□□□□□ -0.88
SGCE-204ENST00000428696 HBDP02042 147 aa9.53□□□□□ -0.88
SGCE-204ENST00000428696 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
SGCE-204ENST00000428696 LINC00526Q96FQ7 95 aa9.52□□□□□ -0.89
SGCE-204ENST00000428696 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
SGCE-204ENST00000428696 NPSP0C0P6 89 aa9.51□□□□□ -0.89
SGCE-204ENST00000428696 COX6A2Q02221 97 aa9.51□□□□□ -0.89
SGCE-204ENST00000428696 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
SGCE-204ENST00000428696 C15orf56Q8N910 161 aa9.51□□□□□ -0.89
SGCE-204ENST00000428696 AMELXQ99217 191 aa9.51□□□□□ -0.89
SGCE-204ENST00000428696 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
SGCE-204ENST00000428696 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
SGCE-204ENST00000428696 UBE2D1P51668 147 aa9.5□□□□□ -0.89
SGCE-204ENST00000428696 KRTAP10-1P60331 282 aa9.5□□□□□ -0.89
SGCE-204ENST00000428696 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
SGCE-204ENST00000428696 LINC00173Q6ZV60 143 aa9.5□□□□□ -0.89
SGCE-204ENST00000428696 A0A096LNJ9 63 aa9.49□□□□□ -0.89
SGCE-204ENST00000428696 SERF1AO75920 110 aa9.49□□□□□ -0.89
SGCE-204ENST00000428696 APOMO95445 188 aa9.49□□□□□ -0.89
SGCE-204ENST00000428696 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
SGCE-204ENST00000428696 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.48□□□□□ -0.89
SGCE-204ENST00000428696 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
SGCE-204ENST00000428696 ATP5LO75964 103 aa9.48□□□□□ -0.89
SGCE-204ENST00000428696 PMVKQ15126 192 aa9.48□□□□□ -0.89
SGCE-204ENST00000428696 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
SGCE-204ENST00000428696 PDZD11Q5EBL8 140 aa9.48□□□□□ -0.89
SGCE-204ENST00000428696 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
SGCE-204ENST00000428696 FABP4P15090 132 aa9.47□□□□□ -0.89
SGCE-204ENST00000428696 SEC11AP67812 179 aa9.47□□□□□ -0.89
SGCE-204ENST00000428696 ORAOV1Q8WV07 137 aa9.47□□□□□ -0.89
SGCE-204ENST00000428696 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 H0Y8G0 127 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 NUPR1O60356 82 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 HERVK_113P63121 156 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 SPAG11BQ08648 103 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
SGCE-204ENST00000428696 PACRGQ96M98 296 aaPredicted RBP9.46□□□□□ -0.9
SGCE-204ENST00000428696 A0A087WZ39 114 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BKO60814 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 SLPIP03973 132 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BJP06899 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BOP23527 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BBP33778 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BDP58876 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BCP62807 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HAMPP81172 84 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST2H2BEQ16778 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 IFI27L1Q96BM0 104 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
SGCE-204ENST00000428696 IGHV3-64A0A075B6Q5 118 aa9.44□□□□□ -0.9
SGCE-204ENST00000428696 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
SGCE-204ENST00000428696 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
SGCE-204ENST00000428696 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
SGCE-204ENST00000428696 LEPROTL1O95214 131 aa9.43□□□□□ -0.9
SGCE-204ENST00000428696 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
SGCE-204ENST00000428696 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
SGCE-204ENST00000428696 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
SGCE-204ENST00000428696 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
SGCE-204ENST00000428696 PRSS2P07478 247 aa9.42□□□□□ -0.9
SGCE-204ENST00000428696 LINC00310P59036 64 aa9.42□□□□□ -0.9
SGCE-204ENST00000428696 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
SGCE-204ENST00000428696 FAM30AQ9NZY2 134 aa9.42□□□□□ -0.9
SGCE-204ENST00000428696 OR10D4PQ8NGN7 298 aa9.41□□□□□ -0.9
SGCE-204ENST00000428696 CHTOPQ9Y3Y2 248 aaKnown RBP9.41□□□□□ -0.9
SGCE-204ENST00000428696 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.9
SGCE-204ENST00000428696 C6orf226Q5I0X4 101 aa9.4□□□□□ -0.9
SGCE-204ENST00000428696 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.9
SGCE-204ENST00000428696 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
SGCE-204ENST00000428696 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.91
SGCE-204ENST00000428696 SPINK8P0C7L1 97 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 Q6ZRU5 148 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 FAM19A3Q7Z5A8 133 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 H3BRM9 83 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 CKS1BP61024 79 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 SDIM1Q6ZPB5 146 aa9.39□□□□□ -0.91
SGCE-204ENST00000428696 LRP1BQ9NZR2 4599 aa9.38□□□□□ -0.91
SGCE-204ENST00000428696 IGKV2-24A0A0C4DH68 120 aa9.38□□□□□ -0.91
SGCE-204ENST00000428696 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
SGCE-204ENST00000428696 UNQ6190/PRO20217Q6UXQ8 127 aa9.38□□□□□ -0.91
SGCE-204ENST00000428696 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
SGCE-204ENST00000428696 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
SGCE-204ENST00000428696 NDUFA1O15239 70 aa9.37□□□□□ -0.91
SGCE-204ENST00000428696 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
SGCE-204ENST00000428696 C2orf82Q6UX34 121 aa9.37□□□□□ -0.91
SGCE-204ENST00000428696 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
SGCE-204ENST00000428696 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
SGCE-204ENST00000428696 XGP55808 180 aa9.36□□□□□ -0.91
SGCE-204ENST00000428696 GAGE2BQ13066 116 aa9.36□□□□□ -0.91
SGCE-204ENST00000428696 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
SGCE-204ENST00000428696 MRPL35Q9NZE8 188 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms