RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
VARS-216ENST00000428445 IMMP2LQ96T52 175 aa10.07□□□□□ -0.8
VARS-216ENST00000428445 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
VARS-216ENST00000428445 S100A8P05109 93 aa10.06□□□□□ -0.8
VARS-216ENST00000428445 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
VARS-216ENST00000428445 SPANXA1Q9NS26 97 aa10.06□□□□□ -0.8
VARS-216ENST00000428445 MRPL35Q9NZE8 188 aaKnown RBP10.06□□□□□ -0.8
VARS-216ENST00000428445 NAT8Q9UHE5 227 aa10.06□□□□□ -0.8
VARS-216ENST00000428445 F8W036 122 aa10.05□□□□□ -0.8
VARS-216ENST00000428445 MRPS36P82909 103 aaKnown RBP10.05□□□□□ -0.8
VARS-216ENST00000428445 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
VARS-216ENST00000428445 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
VARS-216ENST00000428445 PPBPP02775 128 aa10.04□□□□□ -0.8
VARS-216ENST00000428445 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
VARS-216ENST00000428445 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
VARS-216ENST00000428445 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
VARS-216ENST00000428445 TLX1NBP0CAT3 122 aa10.03□□□□□ -0.8
VARS-216ENST00000428445 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
VARS-216ENST00000428445 ADIRFQ15847 76 aa10.03□□□□□ -0.8
VARS-216ENST00000428445 A0A087WZ39 114 aa10.02□□□□□ -0.81
VARS-216ENST00000428445 NDUFA1O15239 70 aa10.02□□□□□ -0.81
VARS-216ENST00000428445 PEA15Q15121 130 aa10.02□□□□□ -0.81
VARS-216ENST00000428445 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.81
VARS-216ENST00000428445 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
VARS-216ENST00000428445 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
VARS-216ENST00000428445 HBBP68871 147 aa10□□□□□ -0.81
VARS-216ENST00000428445 FAM19A5Q7Z5A7 132 aaPredicted RBP10□□□□□ -0.81
VARS-216ENST00000428445 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
VARS-216ENST00000428445 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
VARS-216ENST00000428445 D6R8Y8 96 aa9.99□□□□□ -0.81
VARS-216ENST00000428445 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
VARS-216ENST00000428445 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
VARS-216ENST00000428445 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
VARS-216ENST00000428445 hCG_2014768A0A024R1R8 64 aa9.98□□□□□ -0.81
VARS-216ENST00000428445 RAB5AP20339 215 aa9.98□□□□□ -0.81
VARS-216ENST00000428445 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
VARS-216ENST00000428445 TGIF2-C20orf24A0A0A6YYL0 155 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 A0A1B0GXF2 115 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 IFITM10A6NMD0 228 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 PRSS47A8MTI9 375 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 C9JQL5 133 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 H0Y9J4 135 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
VARS-216ENST00000428445 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 MUC2Q02817 5179 aa9.97□□□□□ -0.81
VARS-216ENST00000428445 KRTAP1-4P0C5Y4 121 aa9.96□□□□□ -0.82
VARS-216ENST00000428445 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.82
VARS-216ENST00000428445 ORMDL3Q8N138 153 aa9.96□□□□□ -0.82
VARS-216ENST00000428445 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.82
VARS-216ENST00000428445 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
VARS-216ENST00000428445 NPYP01303 97 aa9.95□□□□□ -0.82
VARS-216ENST00000428445 MRPL54Q6P161 138 aaKnown RBP9.95□□□□□ -0.82
VARS-216ENST00000428445 LAMTOR2Q9Y2Q5 125 aa9.95□□□□□ -0.82
VARS-216ENST00000428445 KIAA0087Q14695 138 aa9.94□□□□□ -0.82
VARS-216ENST00000428445 PRELID3AQ96N28 172 aa9.93□□□□□ -0.82
VARS-216ENST00000428445 NPSP0C0P6 89 aa9.92□□□□□ -0.82
VARS-216ENST00000428445 SRSF3P84103 164 aaKnown RBP9.92□□□□□ -0.82
VARS-216ENST00000428445 PRR4Q16378 134 aa9.92□□□□□ -0.82
VARS-216ENST00000428445 LINC00242Q5T6M2 205 aa9.92□□□□□ -0.82
VARS-216ENST00000428445 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
VARS-216ENST00000428445 TMEM141Q96I45 108 aa9.92□□□□□ -0.82
VARS-216ENST00000428445 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
VARS-216ENST00000428445 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
VARS-216ENST00000428445 M0QXV9 152 aa9.91□□□□□ -0.82
VARS-216ENST00000428445 UBE2BP63146 152 aa9.91□□□□□ -0.82
VARS-216ENST00000428445 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
VARS-216ENST00000428445 PACRGQ96M98 296 aaPredicted RBP9.91□□□□□ -0.82
VARS-216ENST00000428445 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
VARS-216ENST00000428445 K7EMI3 77 aa9.9□□□□□ -0.82
VARS-216ENST00000428445 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
VARS-216ENST00000428445 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
VARS-216ENST00000428445 C2orf88Q9BSF0 95 aa9.89□□□□□ -0.83
VARS-216ENST00000428445 UBE2D1P51668 147 aa9.88□□□□□ -0.83
VARS-216ENST00000428445 Q6ZN92 141 aa9.88□□□□□ -0.83
VARS-216ENST00000428445 CYSLTR1Q9Y271 337 aa9.88□□□□□ -0.83
VARS-216ENST00000428445 G0S2P27469 103 aa9.87□□□□□ -0.83
VARS-216ENST00000428445 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
VARS-216ENST00000428445 AMELXQ99217 191 aa9.87□□□□□ -0.83
VARS-216ENST00000428445 VCX2Q9H322 139 aa9.87□□□□□ -0.83
VARS-216ENST00000428445 MAP1LC3AQ9H492 121 aa9.87□□□□□ -0.83
VARS-216ENST00000428445 TSPAN13O95857 204 aa9.86□□□□□ -0.83
VARS-216ENST00000428445 RPL13AP40429 203 aaKnown RBP9.86□□□□□ -0.83
VARS-216ENST00000428445 SEC11AP67812 179 aa9.86□□□□□ -0.83
VARS-216ENST00000428445 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
VARS-216ENST00000428445 ORMDL2Q53FV1 153 aa9.86□□□□□ -0.83
VARS-216ENST00000428445 LINC00469Q8N7U9 141 aa9.86□□□□□ -0.83
VARS-216ENST00000428445 Q8N8P6 123 aa9.86□□□□□ -0.83
VARS-216ENST00000428445 ANAPC16Q96DE5 110 aa9.86□□□□□ -0.83
VARS-216ENST00000428445 CARHSP1Q9Y2V2 147 aaKnown RBP9.86□□□□□ -0.83
VARS-216ENST00000428445 PRSS2P07478 247 aa9.85□□□□□ -0.83
VARS-216ENST00000428445 C6orf226Q5I0X4 101 aa9.85□□□□□ -0.83
VARS-216ENST00000428445 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
VARS-216ENST00000428445 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
VARS-216ENST00000428445 LOC389332A0A1B0GUA5 103 aa9.84□□□□□ -0.83
VARS-216ENST00000428445 Q8IZM0 81 aa9.84□□□□□ -0.83
VARS-216ENST00000428445 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
VARS-216ENST00000428445 CKS1BP61024 79 aa9.83□□□□□ -0.84
VARS-216ENST00000428445 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
VARS-216ENST00000428445 IGIPA6NJ69 53 aa9.82□□□□□ -0.84
VARS-216ENST00000428445 NUPR1O60356 82 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 256.4 ms