RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
TRIM39-207ENST00000428404 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 LY6G6CO95867 125 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 HERVK_113P63121 156 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 Q6ZR54 194 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 CHAC1Q9BUX1 264 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
TRIM39-207ENST00000428404 KMT2AQ03164 3969 aa8.36□□□□□ -1.07
TRIM39-207ENST00000428404 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
TRIM39-207ENST00000428404 XCL1P47992 114 aa8.35□□□□□ -1.07
TRIM39-207ENST00000428404 FOXI1Q12951 378 aa8.35□□□□□ -1.07
TRIM39-207ENST00000428404 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
TRIM39-207ENST00000428404 A0A087WZ39 114 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 GAGE12HA6NDE8 117 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 LINC01561Q8N1V8 128 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 LINC00469Q8N7U9 141 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 C1orf43Q9BWL3 253 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 Q9HAA7 133 aa8.33□□□□□ -1.08
TRIM39-207ENST00000428404 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
TRIM39-207ENST00000428404 IGKV2D-24A0A075B6R9 120 aa8.32□□□□□ -1.08
TRIM39-207ENST00000428404 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
TRIM39-207ENST00000428404 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
TRIM39-207ENST00000428404 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
TRIM39-207ENST00000428404 RMI2Q96E14 147 aa8.32□□□□□ -1.08
TRIM39-207ENST00000428404 H3BRM9 83 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 M0R2N4 97 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 COX7A2LO14548 114 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 C5orf38Q86SI9 138 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 STPG4Q8N801 248 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 COX11Q9Y6N1 276 aa8.31□□□□□ -1.08
TRIM39-207ENST00000428404 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 LCE6AA0A183 80 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 hDV102S1A0JD36 115 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 MAJINQ3KP22 176 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-207ENST00000428404 MAPKAPK5-AS1Q8N8E1 139 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 TM2D2Q9BX73 214 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
TRIM39-207ENST00000428404 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
TRIM39-207ENST00000428404 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
TRIM39-207ENST00000428404 SPINK8P0C7L1 97 aa8.29□□□□□ -1.08
TRIM39-207ENST00000428404 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
TRIM39-207ENST00000428404 E9PLD3 99 aa8.28□□□□□ -1.08
TRIM39-207ENST00000428404 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
TRIM39-207ENST00000428404 IGHV3-64A0A075B6Q5 118 aa8.27□□□□□ -1.09
TRIM39-207ENST00000428404 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
TRIM39-207ENST00000428404 IGKV2D-26A0A0A0MRZ7 120 aa8.26□□□□□ -1.09
TRIM39-207ENST00000428404 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
TRIM39-207ENST00000428404 MALP21145 153 aa8.26□□□□□ -1.09
TRIM39-207ENST00000428404 HERVK_113P61574 105 aa8.26□□□□□ -1.09
TRIM39-207ENST00000428404 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
TRIM39-207ENST00000428404 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
TRIM39-207ENST00000428404 LEPROTO15243 131 aa8.25□□□□□ -1.09
TRIM39-207ENST00000428404 APOMO95445 188 aa8.25□□□□□ -1.09
TRIM39-207ENST00000428404 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
TRIM39-207ENST00000428404 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
TRIM39-207ENST00000428404 LINC00518Q8N0U6 118 aa8.25□□□□□ -1.09
TRIM39-207ENST00000428404 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
TRIM39-207ENST00000428404 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
TRIM39-207ENST00000428404 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
TRIM39-207ENST00000428404 C12orf57Q99622 126 aa8.24□□□□□ -1.09
TRIM39-207ENST00000428404 PAM16Q9Y3D7 125 aa8.24□□□□□ -1.09
TRIM39-207ENST00000428404 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
TRIM39-207ENST00000428404 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
TRIM39-207ENST00000428404 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 J3QQQ9 107 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 S100A12P80511 92 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 Q8IZM0 81 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 ORAOV1Q8WV07 137 aa8.23□□□□□ -1.09
TRIM39-207ENST00000428404 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
TRIM39-207ENST00000428404 PSCAO43653 123 aa8.22□□□□□ -1.09
TRIM39-207ENST00000428404 WFDC2Q14508 124 aa8.22□□□□□ -1.09
TRIM39-207ENST00000428404 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
TRIM39-207ENST00000428404 ZNF625Q96I27 306 aaPredicted RBP8.21□□□□□ -1.1
TRIM39-207ENST00000428404 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
TRIM39-207ENST00000428404 RTL8CO15255 209 aa8.2□□□□□ -1.1
TRIM39-207ENST00000428404 NMUP48645 174 aa8.2□□□□□ -1.1
TRIM39-207ENST00000428404 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
TRIM39-207ENST00000428404 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
TRIM39-207ENST00000428404 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-207ENST00000428404 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
TRIM39-207ENST00000428404 F8WDY8 70 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 NDUFA1O15239 70 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 COX8AP10176 69 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
TRIM39-207ENST00000428404 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 LINC00526Q96FQ7 95 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 RYR2Q92736 4967 aa8.19□□□□□ -1.1
TRIM39-207ENST00000428404 A0A087WTM6 91 aa8.18□□□□□ -1.1
TRIM39-207ENST00000428404 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms