RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SNURFQ9Y675 71 aa11.35□□□□□ -0.59
C9orf3-206ENST00000428313 Q8N814 137 aa11.35□□□□□ -0.59
C9orf3-206ENST00000428313 OTOGLQ3ZCN5 2332 aa11.34□□□□□ -0.59
C9orf3-206ENST00000428313 A8MTW9 85 aa11.34□□□□□ -0.59
C9orf3-206ENST00000428313 BOD1L1Q8NFC6 3051 aa11.34□□□□□ -0.59
C9orf3-206ENST00000428313 K7EQD1 137 aa11.34□□□□□ -0.59
C9orf3-206ENST00000428313 PAX4O43316 350 aa11.34□□□□□ -0.59
C9orf3-206ENST00000428313 NBL1P41271 181 aa11.34□□□□□ -0.59
C9orf3-206ENST00000428313 TRAV10A0A0B4J240 114 aa11.32□□□□□ -0.6
C9orf3-206ENST00000428313 A0A0U1RQV1 116 aa11.32□□□□□ -0.6
C9orf3-206ENST00000428313 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-206ENST00000428313 LOC110117498A0A087WWA1 95 aa11.31□□□□□ -0.6
C9orf3-206ENST00000428313 CXCL6P80162 114 aa11.3□□□□□ -0.6
C9orf3-206ENST00000428313 CDSNQ15517 529 aa11.3□□□□□ -0.6
C9orf3-206ENST00000428313 Q6ZQT0 140 aa11.3□□□□□ -0.6
C9orf3-206ENST00000428313 DCHS2Q6V1P9 2916 aa11.3□□□□□ -0.6
C9orf3-206ENST00000428313 NTM-AS1Q6ZSK4 140 aa11.3□□□□□ -0.6
C9orf3-206ENST00000428313 TRBV7-4A0A0J9YYF1 115 aa11.29□□□□□ -0.6
C9orf3-206ENST00000428313 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
C9orf3-206ENST00000428313 GRNP28799 593 aaKnown RBP11.29□□□□□ -0.6
C9orf3-206ENST00000428313 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
C9orf3-206ENST00000428313 ANKHD1Q8IWZ3 2542 aaKnown RBP11.29□□□□□ -0.6
C9orf3-206ENST00000428313 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
C9orf3-206ENST00000428313 MIFP14174 115 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 LMO4P61968 165 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 PIEZO1Q92508 2521 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 A6NDX4 124 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 PRM2P04554 102 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 Q6ZTI0 123 aa11.28□□□□□ -0.6
C9orf3-206ENST00000428313 MUC6Q6W4X9 2439 aa11.27□□□□□ -0.61
C9orf3-206ENST00000428313 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
C9orf3-206ENST00000428313 ERC2-IT1O76042 136 aa11.26□□□□□ -0.61
C9orf3-206ENST00000428313 CCL21O00585 134 aa11.26□□□□□ -0.61
C9orf3-206ENST00000428313 LY6EQ16553 131 aa11.26□□□□□ -0.61
C9orf3-206ENST00000428313 Q6ZVQ6 151 aa11.26□□□□□ -0.61
C9orf3-206ENST00000428313 A0A096LNT2 108 aa11.25□□□□□ -0.61
C9orf3-206ENST00000428313 UBE2L6O14933 153 aa11.25□□□□□ -0.61
C9orf3-206ENST00000428313 NANOS2P60321 138 aaKnown RBP11.24□□□□□ -0.61
C9orf3-206ENST00000428313 HAMPP81172 84 aa11.24□□□□□ -0.61
C9orf3-206ENST00000428313 BPESC1Q9GZL8 116 aa11.24□□□□□ -0.61
C9orf3-206ENST00000428313 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
C9orf3-206ENST00000428313 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
C9orf3-206ENST00000428313 ADORA2A-AS1P86434 159 aa11.23□□□□□ -0.61
C9orf3-206ENST00000428313 C6orf223Q8N319 242 aa11.23□□□□□ -0.61
C9orf3-206ENST00000428313 A0A087WZ39 114 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 IGHV3OR16-9A0A0B4J2B5 98 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 H3BUX3 64 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 PDE6GP18545 87 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 BRD3OSQ6XYD6 125 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 Q8N3U1 123 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 TM2D3Q9BRN9 247 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 LRBAP50851 2863 aa11.22□□□□□ -0.61
C9orf3-206ENST00000428313 DEFB131AP59861 70 aa11.21□□□□□ -0.61
C9orf3-206ENST00000428313 FAM229BQ4G0N7 80 aa11.2□□□□□ -0.62
C9orf3-206ENST00000428313 TMEM254Q8TBM7 123 aa11.2□□□□□ -0.62
C9orf3-206ENST00000428313 IGHV4-38-2P0DP08 117 aa11.2□□□□□ -0.62
C9orf3-206ENST00000428313 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
C9orf3-206ENST00000428313 LAMTOR3Q9UHA4 124 aa11.2□□□□□ -0.62
C9orf3-206ENST00000428313 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-206ENST00000428313 COL6A6A6NMZ7 2263 aa11.19□□□□□ -0.62
C9orf3-206ENST00000428313 INSP01308 110 aa11.19□□□□□ -0.62
C9orf3-206ENST00000428313 NREPQ16612 68 aa11.19□□□□□ -0.62
C9orf3-206ENST00000428313 ESRGQ1W209 222 aa11.19□□□□□ -0.62
C9orf3-206ENST00000428313 C11orf44Q8N8P7 122 aa11.19□□□□□ -0.62
C9orf3-206ENST00000428313 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
C9orf3-206ENST00000428313 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
C9orf3-206ENST00000428313 IL17DQ8TAD2 202 aa11.18□□□□□ -0.62
C9orf3-206ENST00000428313 MPLKIPQ8TAP9 179 aa11.18□□□□□ -0.62
C9orf3-206ENST00000428313 LAMA5O15230 3695 aa11.17□□□□□ -0.62
C9orf3-206ENST00000428313 SORL1Q92673 2214 aa11.17□□□□□ -0.62
C9orf3-206ENST00000428313 H3BQ85 93 aa11.16□□□□□ -0.62
C9orf3-206ENST00000428313 RNASE1P07998 156 aaKnown RBP11.16□□□□□ -0.62
C9orf3-206ENST00000428313 LINC00575Q6W349 94 aa11.16□□□□□ -0.62
C9orf3-206ENST00000428313 C1orf158Q8N1D5 194 aa11.16□□□□□ -0.62
C9orf3-206ENST00000428313 M0R2N4 97 aa11.15□□□□□ -0.62
C9orf3-206ENST00000428313 DMXL1Q9Y485 3027 aa11.15□□□□□ -0.62
C9orf3-206ENST00000428313 TRGV1A0A0A0MS02 117 aa11.15□□□□□ -0.62
C9orf3-206ENST00000428313 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
C9orf3-206ENST00000428313 BSNQ9UPA5 3926 aa11.15□□□□□ -0.63
C9orf3-206ENST00000428313 C6orf226Q5I0X4 101 aa11.14□□□□□ -0.63
C9orf3-206ENST00000428313 ACACAQ13085 2346 aa11.14□□□□□ -0.63
C9orf3-206ENST00000428313 PMAIP1Q13794 54 aa11.14□□□□□ -0.63
C9orf3-206ENST00000428313 PRYO14603 147 aa11.13□□□□□ -0.63
C9orf3-206ENST00000428313 Q6ZRU5 148 aa11.12□□□□□ -0.63
C9orf3-206ENST00000428313 C11orf68Q9H3H3 251 aaKnown RBP11.12□□□□□ -0.63
C9orf3-206ENST00000428313 HRNRQ86YZ3 2850 aaPredicted RBP11.12□□□□□ -0.63
C9orf3-206ENST00000428313 BPY2O14599 106 aa11.12□□□□□ -0.63
C9orf3-206ENST00000428313 FUSP35637 526 aaKnown RBP eCLIP11.12□□□□□ -0.63
C9orf3-206ENST00000428313 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
C9orf3-206ENST00000428313 C6orf99Q4VX62 202 aa11.11□□□□□ -0.63
C9orf3-206ENST00000428313 Q8IZM0 81 aa11.11□□□□□ -0.63
C9orf3-206ENST00000428313 Q6ZTC4 211 aa11.11□□□□□ -0.63
C9orf3-206ENST00000428313 ZNF843Q8N446 348 aa11.11□□□□□ -0.63
C9orf3-206ENST00000428313 PTPRZ1P23471 2315 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-206ENST00000428313 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
C9orf3-206ENST00000428313 IGLV4-60A0A075B6I1 120 aa11.09□□□□□ -0.63
C9orf3-206ENST00000428313 MAP6D1Q9H9H5 199 aa11.09□□□□□ -0.63
C9orf3-206ENST00000428313 ANKRD11Q6UB99 2663 aaPredicted RBP11.09□□□□□ -0.63
C9orf3-206ENST00000428313 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 356 ms