RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
PHF1-204ENST00000427826 Q6ZUT4 128 aa9.59□□□□□ -0.87
PHF1-204ENST00000427826 STPG4Q8N801 248 aa9.59□□□□□ -0.87
PHF1-204ENST00000427826 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
PHF1-204ENST00000427826 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
PHF1-204ENST00000427826 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
PHF1-204ENST00000427826 LRP1Q07954 4544 aaKnown RBP9.58□□□□□ -0.88
PHF1-204ENST00000427826 APOMO95445 188 aa9.58□□□□□ -0.88
PHF1-204ENST00000427826 RAB5AP20339 215 aa9.58□□□□□ -0.88
PHF1-204ENST00000427826 A0A096LNI7 61 aa9.57□□□□□ -0.88
PHF1-204ENST00000427826 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
PHF1-204ENST00000427826 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
PHF1-204ENST00000427826 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
PHF1-204ENST00000427826 Q6ZRU5 148 aa9.57□□□□□ -0.88
PHF1-204ENST00000427826 PKHD1L1Q86WI1 4243 aa9.57□□□□□ -0.88
PHF1-204ENST00000427826 FAT3Q8TDW7 4589 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 APOC3P02656 99 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 COX19Q49B96 90 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 SERTAD4-AS1Q5TG53 156 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 C5orf38Q86SI9 138 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
PHF1-204ENST00000427826 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
PHF1-204ENST00000427826 LOC389332A0A1B0GUA5 103 aa9.55□□□□□ -0.88
PHF1-204ENST00000427826 SNAPINO95295 136 aa9.55□□□□□ -0.88
PHF1-204ENST00000427826 SVBPQ8N300 66 aa9.55□□□□□ -0.88
PHF1-204ENST00000427826 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
PHF1-204ENST00000427826 PRSS47A8MTI9 375 aa9.54□□□□□ -0.88
PHF1-204ENST00000427826 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
PHF1-204ENST00000427826 OR10D4PQ8NGN7 298 aa9.54□□□□□ -0.88
PHF1-204ENST00000427826 IFITM10A6NMD0 228 aa9.53□□□□□ -0.88
PHF1-204ENST00000427826 F8WDY8 70 aa9.53□□□□□ -0.88
PHF1-204ENST00000427826 Q8N8P6 123 aa9.53□□□□□ -0.88
PHF1-204ENST00000427826 GNB1LQ9BYB4 327 aa9.53□□□□□ -0.88
PHF1-204ENST00000427826 PYGO1Q9Y3Y4 419 aa9.53□□□□□ -0.88
PHF1-204ENST00000427826 MT-ND6P03923 174 aa9.52□□□□□ -0.89
PHF1-204ENST00000427826 PTTG1IPP53801 180 aa9.52□□□□□ -0.89
PHF1-204ENST00000427826 SPAG11BQ08648 103 aa9.52□□□□□ -0.89
PHF1-204ENST00000427826 RNF151Q2KHN1 245 aa9.52□□□□□ -0.89
PHF1-204ENST00000427826 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
PHF1-204ENST00000427826 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
PHF1-204ENST00000427826 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
PHF1-204ENST00000427826 TMA7Q9Y2S6 64 aaKnown RBP9.52□□□□□ -0.89
PHF1-204ENST00000427826 IGHV3OR16-9A0A0B4J2B5 98 aa9.51□□□□□ -0.89
PHF1-204ENST00000427826 K7EMI3 77 aa9.51□□□□□ -0.89
PHF1-204ENST00000427826 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
PHF1-204ENST00000427826 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
PHF1-204ENST00000427826 TGIF2-C20orf24A0A0A6YYL0 155 aa9.5□□□□□ -0.89
PHF1-204ENST00000427826 GHRHP01286 108 aa9.5□□□□□ -0.89
PHF1-204ENST00000427826 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
PHF1-204ENST00000427826 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
PHF1-204ENST00000427826 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
PHF1-204ENST00000427826 TMEM141Q96I45 108 aa9.49□□□□□ -0.89
PHF1-204ENST00000427826 CYSLTR1Q9Y271 337 aa9.49□□□□□ -0.89
PHF1-204ENST00000427826 IGLV4-3A0A075B6K6 122 aa9.48□□□□□ -0.89
PHF1-204ENST00000427826 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.48□□□□□ -0.89
PHF1-204ENST00000427826 G0S2P27469 103 aa9.48□□□□□ -0.89
PHF1-204ENST00000427826 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
PHF1-204ENST00000427826 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
PHF1-204ENST00000427826 NDUFA1O15239 70 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 NPSP0C0P6 89 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
PHF1-204ENST00000427826 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 Q6ZN92 141 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 TEX43Q6ZNM6 134 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 Q6ZRP5 223 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
PHF1-204ENST00000427826 A0A087WZ39 114 aa9.46□□□□□ -0.9
PHF1-204ENST00000427826 EIF4EBP3O60516 100 aaPredicted RBP9.45□□□□□ -0.9
PHF1-204ENST00000427826 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
PHF1-204ENST00000427826 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
PHF1-204ENST00000427826 VCX2Q9H322 139 aa9.45□□□□□ -0.9
PHF1-204ENST00000427826 TRAPPC1Q9Y5R8 145 aa9.45□□□□□ -0.9
PHF1-204ENST00000427826 A0A0J9YXV3 536 aa9.44□□□□□ -0.9
PHF1-204ENST00000427826 PAPPA-AS1Q5QFB9 102 aa9.44□□□□□ -0.9
PHF1-204ENST00000427826 SPINK6Q6UWN8 80 aa9.44□□□□□ -0.9
PHF1-204ENST00000427826 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
PHF1-204ENST00000427826 A0A1W2PNN7 141 aa9.43□□□□□ -0.9
PHF1-204ENST00000427826 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
PHF1-204ENST00000427826 UBE2D1P51668 147 aa9.43□□□□□ -0.9
PHF1-204ENST00000427826 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
PHF1-204ENST00000427826 SMCO4Q9NRQ5 59 aa9.43□□□□□ -0.9
PHF1-204ENST00000427826 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
PHF1-204ENST00000427826 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
PHF1-204ENST00000427826 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
PHF1-204ENST00000427826 AMELXQ99217 191 aa9.42□□□□□ -0.9
PHF1-204ENST00000427826 PLA2G2DQ9UNK4 145 aa9.42□□□□□ -0.9
PHF1-204ENST00000427826 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
PHF1-204ENST00000427826 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
PHF1-204ENST00000427826 REG3GQ6UW15 175 aa9.41□□□□□ -0.9
PHF1-204ENST00000427826 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 SEC11AP67812 179 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 TOMM6Q96B49 74 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
PHF1-204ENST00000427826 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms