RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 MAJINQ3KP22 176 aa9.25□□□□□ -0.93
NCKIPSD-205ENST00000426678 C2orf66Q6UXQ4 117 aa9.25□□□□□ -0.93
NCKIPSD-205ENST00000426678 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
NCKIPSD-205ENST00000426678 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
NCKIPSD-205ENST00000426678 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 RHEBQ15382 184 aa9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 KIAA1644Q3SXP7 199 aa9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 RPS10P5Q9NQ39 176 aa9.24□□□□□ -0.93
NCKIPSD-205ENST00000426678 A0A096LNI7 61 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 TGIF2-C20orf24A0A0A6YYL0 155 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 COX19Q49B96 90 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 C10orf91Q5T1B1 145 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 Q6ZN92 141 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 TEX43Q6ZNM6 134 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
NCKIPSD-205ENST00000426678 MYCBP2O75592 4640 aa9.22□□□□□ -0.93
NCKIPSD-205ENST00000426678 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
NCKIPSD-205ENST00000426678 Q6ZRU5 148 aa9.22□□□□□ -0.93
NCKIPSD-205ENST00000426678 ORAOV1Q8WV07 137 aa9.22□□□□□ -0.93
NCKIPSD-205ENST00000426678 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-205ENST00000426678 MT-ND6P03923 174 aa9.21□□□□□ -0.94
NCKIPSD-205ENST00000426678 G0S2P27469 103 aa9.21□□□□□ -0.94
NCKIPSD-205ENST00000426678 STPG4Q8N801 248 aa9.21□□□□□ -0.94
NCKIPSD-205ENST00000426678 C7orf33Q8WU49 177 aa9.21□□□□□ -0.94
NCKIPSD-205ENST00000426678 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
NCKIPSD-205ENST00000426678 J3QL48 77 aa9.2□□□□□ -0.94
NCKIPSD-205ENST00000426678 NPSP0C0P6 89 aa9.2□□□□□ -0.94
NCKIPSD-205ENST00000426678 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
NCKIPSD-205ENST00000426678 VCX2Q9H322 139 aa9.2□□□□□ -0.94
NCKIPSD-205ENST00000426678 UBE2D1P51668 147 aa9.19□□□□□ -0.94
NCKIPSD-205ENST00000426678 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
NCKIPSD-205ENST00000426678 LINC00242Q5T6M2 205 aa9.19□□□□□ -0.94
NCKIPSD-205ENST00000426678 A0A087WZ39 114 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 F8WDY8 70 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 NDUFA1O15239 70 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 APOC3P02656 99 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 PTTG1IPP53801 180 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 FABP9Q0Z7S8 132 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 GAGE2BQ13066 116 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 LINC00173Q6ZV60 143 aa9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
NCKIPSD-205ENST00000426678 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
NCKIPSD-205ENST00000426678 RPL18AQ02543 176 aaKnown RBP9.17□□□□□ -0.94
NCKIPSD-205ENST00000426678 ZC2HC1BQ5TFG8 222 aa9.17□□□□□ -0.94
NCKIPSD-205ENST00000426678 AMELXQ99217 191 aa9.17□□□□□ -0.94
NCKIPSD-205ENST00000426678 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
NCKIPSD-205ENST00000426678 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
NCKIPSD-205ENST00000426678 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 SNAPINO95295 136 aa9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 SVBPQ8N300 66 aa9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 TOMM6Q96B49 74 aa9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 SMCO4Q9NRQ5 59 aa9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 MRPL35Q9NZE8 188 aaKnown RBP9.16□□□□□ -0.94
NCKIPSD-205ENST00000426678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.15□□□□□ -0.94
NCKIPSD-205ENST00000426678 FA2HQ7L5A8 372 aa9.15□□□□□ -0.94
NCKIPSD-205ENST00000426678 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
NCKIPSD-205ENST00000426678 HERC1Q15751 4861 aa9.15□□□□□ -0.95
NCKIPSD-205ENST00000426678 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
NCKIPSD-205ENST00000426678 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
NCKIPSD-205ENST00000426678 HNRNPA3P51991 378 aaKnown RBP9.14□□□□□ -0.95
NCKIPSD-205ENST00000426678 SEC11AP67812 179 aa9.14□□□□□ -0.95
NCKIPSD-205ENST00000426678 ERASQ7Z444 233 aa9.14□□□□□ -0.95
NCKIPSD-205ENST00000426678 LINC01561Q8N1V8 128 aa9.14□□□□□ -0.95
NCKIPSD-205ENST00000426678 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 OXTP01178 125 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 HERVK_113P63121 156 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 UNQ6190/PRO20217Q6UXQ8 127 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
NCKIPSD-205ENST00000426678 PRSS2P07478 247 aa9.11□□□□□ -0.95
NCKIPSD-205ENST00000426678 KIAA0087Q14695 138 aa9.11□□□□□ -0.95
NCKIPSD-205ENST00000426678 PACRGQ96M98 296 aaPredicted RBP9.11□□□□□ -0.95
NCKIPSD-205ENST00000426678 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
NCKIPSD-205ENST00000426678 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
NCKIPSD-205ENST00000426678 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
NCKIPSD-205ENST00000426678 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
NCKIPSD-205ENST00000426678 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
NCKIPSD-205ENST00000426678 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
NCKIPSD-205ENST00000426678 C2orf82Q6UX34 121 aa9.09□□□□□ -0.95
NCKIPSD-205ENST00000426678 CDKN2A-AS1Q9UH64 79 aa9.09□□□□□ -0.95
NCKIPSD-205ENST00000426678 PKHD1L1Q86WI1 4243 aa9.09□□□□□ -0.95
NCKIPSD-205ENST00000426678 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
NCKIPSD-205ENST00000426678 CKS1BP61024 79 aa9.08□□□□□ -0.96
NCKIPSD-205ENST00000426678 LINC00469Q8N7U9 141 aa9.08□□□□□ -0.96
NCKIPSD-205ENST00000426678 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
NCKIPSD-205ENST00000426678 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
NCKIPSD-205ENST00000426678 Q6ZRP5 223 aa9.07□□□□□ -0.96
NCKIPSD-205ENST00000426678 Q8IZM0 81 aa9.07□□□□□ -0.96
NCKIPSD-205ENST00000426678 C18orf32Q8TCD1 76 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms