RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 A0A087WYN8 130 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 TRBV6-5A0A0K0K1A5 114 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 H7C423 109 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 APCSP02743 223 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 ADIRFQ15847 76 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 AMMECR1LQ6DCA0 310 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 RNASEKQ6P5S7 137 aaKnown RBP3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 KRTAP26-1Q6PEX3 210 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 NAT8BQ9UHF3 227 aa3.98□□□□□ -1.77
NIF3L1-207ENST00000426253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 IGKV3OR2-268A0A0C4DH90 116 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 SMIM27A0A1W2PRY6 76 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 POLR2KP53803 58 aaKnown RBP3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 HERV-K104P63124 156 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 Q6ZSA8 131 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 AMN1Q8IY45 258 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 C9orf163Q8N9P6 203 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 MRAP2Q96G30 205 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 RNF185Q96GF1 192 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 TMEM101Q96IK0 257 aa3.97□□□□□ -1.77
NIF3L1-207ENST00000426253 SMKR1H3BMG3 65 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 PPP1R17O96001 155 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 FGF6P10767 208 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 ESDP10768 282 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 RPS10P46783 165 aaKnown RBP3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 RAB14P61106 215 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 CIRBP-AS1Q8TBR5 109 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 DPH3Q96FX2 82 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 BTF3L4Q96K17 158 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 CHAC1Q9BUX1 264 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 TMEM242Q9NWH2 141 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.78
NIF3L1-207ENST00000426253 TRBV27A0A0K0K1C4 114 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 A0A1B0GW15 77 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 LINC00862A6NCI5 91 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 ZNF25P17030 456 aaPredicted RBP3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 FCER1GP30273 86 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 MRPL51Q4U2R6 128 aaKnown RBP3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 FAM104BQ5XKR9 115 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 SDIM1Q6ZPB5 146 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 OR5A1Q8NGJ0 315 aa3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
NIF3L1-207ENST00000426253 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 LINC00959A0A1B0GUT2 108 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 F8W036 122 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 PPP1R2P9O14990 202 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 S100A8P05109 93 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 CKS2P33552 79 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 SS18Q15532 418 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 ZNF664Q8N3J9 261 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 CDC42SE2Q9NRR3 84 aa3.94□□□□□ -1.78
NIF3L1-207ENST00000426253 IGLV7-46A0A075B6I9 117 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 TRBV24-1A0A075B6N3 115 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 IGHV3-64A0A075B6Q5 118 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 C7orf77A4D0Y5 90 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 XCL1P47992 114 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 CNBPP62633 177 aaKnown RBP3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 SMAGPQ0VAQ4 97 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 MRPL54Q6P161 138 aaKnown RBP3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 C15orf56Q8N910 161 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 KIR2DL4Q99706 377 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 C20orf78Q9BR46 151 aa3.93□□□□□ -1.78
NIF3L1-207ENST00000426253 D6R8Y8 96 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 CCL25O15444 150 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 MT-ND4LP03901 98 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 HBBP68871 147 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 TMEM136Q6ZRR5 245 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 MRPL52Q86TS9 123 aaKnown RBP3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 UBE2D4Q9Y2X8 147 aa3.92□□□□□ -1.78
NIF3L1-207ENST00000426253 IGHV1-58A0A0C4DH39 117 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 A0A0U1RRA0 63 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 A0A1B0GXF2 115 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 C1orf196B1AJZ1 125 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 PANO1I0J062 215 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 TCAPO15273 167 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 PPBPP02775 128 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 RPL32P62910 135 aaKnown RBP3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 COX6A2Q02221 97 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 CLLU1Q5K131 121 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 ATP5L2Q7Z4Y8 100 aa3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 CSDC2Q9Y534 153 aaKnown RBP3.91□□□□□ -1.78
NIF3L1-207ENST00000426253 TNXBP22105 4242 aa3.9□□□□□ -1.78
NIF3L1-207ENST00000426253 TRAV13-1A0A0B4J241 112 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 PHOX2AO14813 284 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 NPYP01303 97 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 RAB5AP20339 215 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 MT3P25713 68 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 RPL37AP61513 92 aaKnown RBP3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 RNASE13Q5GAN3 156 aaKnown RBP3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 ORMDL3Q8N138 153 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 LINC00526Q96FQ7 95 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 PRELID3AQ96N28 172 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 TIMM21Q9BVV7 248 aa3.9□□□□□ -1.79
NIF3L1-207ENST00000426253 GVQW2A0A096LPI5 108 aaPredicted RBP3.89□□□□□ -1.79
NIF3L1-207ENST00000426253 LOC389332A0A1B0GUA5 103 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms