RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 D6R8Y8 96 aa8.86□□□□□ -0.99
SNX3-204ENST00000426155 NUPR1O60356 82 aa8.86□□□□□ -0.99
SNX3-204ENST00000426155 KRTDAPP60985 99 aa8.86□□□□□ -0.99
SNX3-204ENST00000426155 PAM16Q9Y3D7 125 aa8.86□□□□□ -0.99
SNX3-204ENST00000426155 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
SNX3-204ENST00000426155 H7C423 109 aa8.85□□□□□ -0.99
SNX3-204ENST00000426155 CKS2P33552 79 aa8.85□□□□□ -0.99
SNX3-204ENST00000426155 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
SNX3-204ENST00000426155 TMEM136Q6ZRR5 245 aa8.85□□□□□ -0.99
SNX3-204ENST00000426155 Q6ZSA8 131 aa8.85□□□□□ -0.99
SNX3-204ENST00000426155 EPM2AB3EWF7 344 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 VCYO14598 125 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 TNFRSF6BO95407 300 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 NPYP01303 97 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 FCER1GP30273 86 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 HNRNPA3P51991 378 aaKnown RBP8.84□□□□□ -0.99
SNX3-204ENST00000426155 SPATA45Q537H7 98 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 Q5VSD8 79 aa8.84□□□□□ -0.99
SNX3-204ENST00000426155 PPP1R17O96001 155 aa8.83□□□□□ -1
SNX3-204ENST00000426155 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
SNX3-204ENST00000426155 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
SNX3-204ENST00000426155 CHCHD10Q8WYQ3 142 aaPredicted RBP8.83□□□□□ -1
SNX3-204ENST00000426155 TMEM101Q96IK0 257 aa8.83□□□□□ -1
SNX3-204ENST00000426155 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
SNX3-204ENST00000426155 SCXQ7RTU7 201 aa8.82□□□□□ -1
SNX3-204ENST00000426155 C15orf56Q8N910 161 aa8.82□□□□□ -1
SNX3-204ENST00000426155 ORAOV1Q8WV07 137 aa8.82□□□□□ -1
SNX3-204ENST00000426155 KIR2DL4Q99706 377 aa8.82□□□□□ -1
SNX3-204ENST00000426155 hDV102S1A0JD36 115 aa8.81□□□□□ -1
SNX3-204ENST00000426155 HSBP1O75506 76 aa8.81□□□□□ -1
SNX3-204ENST00000426155 LINC00310P59036 64 aa8.81□□□□□ -1
SNX3-204ENST00000426155 BATFQ16520 125 aa8.81□□□□□ -1
SNX3-204ENST00000426155 Q6ZN92 141 aa8.81□□□□□ -1
SNX3-204ENST00000426155 C20orf78Q9BR46 151 aa8.81□□□□□ -1
SNX3-204ENST00000426155 SMIM2Q9BVW6 85 aa8.81□□□□□ -1
SNX3-204ENST00000426155 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
SNX3-204ENST00000426155 UBE2D4Q9Y2X8 147 aa8.81□□□□□ -1
SNX3-204ENST00000426155 LINC00959A0A1B0GUT2 108 aa8.8□□□□□ -1
SNX3-204ENST00000426155 SLPIP03973 132 aa8.8□□□□□ -1
SNX3-204ENST00000426155 IGLC3P0DOY3 106 aa8.8□□□□□ -1
SNX3-204ENST00000426155 XCL1P47992 114 aa8.8□□□□□ -1
SNX3-204ENST00000426155 RPL39P62891 51 aaKnown RBP8.8□□□□□ -1
SNX3-204ENST00000426155 FOXI1Q12951 378 aa8.8□□□□□ -1
SNX3-204ENST00000426155 HIGD2BQ4VC39 106 aa8.8□□□□□ -1
SNX3-204ENST00000426155 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
SNX3-204ENST00000426155 LAMTOR2Q9Y2Q5 125 aa8.8□□□□□ -1
SNX3-204ENST00000426155 CCL25O15444 150 aa8.79□□□□□ -1
SNX3-204ENST00000426155 C3orf79P0CE67 100 aa8.79□□□□□ -1
SNX3-204ENST00000426155 Q6ZUT4 128 aa8.79□□□□□ -1
SNX3-204ENST00000426155 ORMDL3Q8N138 153 aa8.79□□□□□ -1
SNX3-204ENST00000426155 PRELID3AQ96N28 172 aa8.79□□□□□ -1
SNX3-204ENST00000426155 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
SNX3-204ENST00000426155 PANO1I0J062 215 aa8.78□□□□□ -1
SNX3-204ENST00000426155 RPL32P62910 135 aaKnown RBP8.78□□□□□ -1
SNX3-204ENST00000426155 DGAT2L7PQ6IED9 249 aa8.78□□□□□ -1
SNX3-204ENST00000426155 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
SNX3-204ENST00000426155 CHCHD1Q96BP2 118 aaKnown RBP8.78□□□□□ -1
SNX3-204ENST00000426155 PPBPP02775 128 aa8.77□□□□□ -1.01
SNX3-204ENST00000426155 CNBPP62633 177 aaKnown RBP8.77□□□□□ -1.01
SNX3-204ENST00000426155 CIRBP-AS1Q8TBR5 109 aa8.77□□□□□ -1.01
SNX3-204ENST00000426155 C18orf32Q8TCD1 76 aa8.77□□□□□ -1.01
SNX3-204ENST00000426155 CHAC1Q9BUX1 264 aa8.77□□□□□ -1.01
SNX3-204ENST00000426155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
SNX3-204ENST00000426155 LOC389332A0A1B0GUA5 103 aa8.76□□□□□ -1.01
SNX3-204ENST00000426155 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
SNX3-204ENST00000426155 KIAA1644Q3SXP7 199 aa8.76□□□□□ -1.01
SNX3-204ENST00000426155 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
SNX3-204ENST00000426155 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
SNX3-204ENST00000426155 NPSP0C0P6 89 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 SS18Q15532 418 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 LINC00526Q96FQ7 95 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 ALKBH7Q9BT30 221 aaPredicted RBP8.75□□□□□ -1.01
SNX3-204ENST00000426155 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 CSDC2Q9Y534 153 aaKnown RBP8.75□□□□□ -1.01
SNX3-204ENST00000426155 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
SNX3-204ENST00000426155 GVQW2A0A096LPI5 108 aaPredicted RBP8.74□□□□□ -1.01
SNX3-204ENST00000426155 TRAV13-1A0A0B4J241 112 aa8.74□□□□□ -1.01
SNX3-204ENST00000426155 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
SNX3-204ENST00000426155 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
SNX3-204ENST00000426155 SDIM1Q6ZPB5 146 aa8.74□□□□□ -1.01
SNX3-204ENST00000426155 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
SNX3-204ENST00000426155 UBE2V1Q13404 147 aa8.73□□□□□ -1.01
SNX3-204ENST00000426155 CFAP161Q6P656 301 aa8.73□□□□□ -1.01
SNX3-204ENST00000426155 CD164L2Q6UWJ8 174 aa8.73□□□□□ -1.01
SNX3-204ENST00000426155 TIMM21Q9BVV7 248 aa8.73□□□□□ -1.01
SNX3-204ENST00000426155 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
SNX3-204ENST00000426155 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.72□□□□□ -1.01
SNX3-204ENST00000426155 FAM19A2Q8N3H0 131 aa8.72□□□□□ -1.01
SNX3-204ENST00000426155 HSPB8Q9UJY1 196 aa8.72□□□□□ -1.01
SNX3-204ENST00000426155 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
SNX3-204ENST00000426155 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
SNX3-204ENST00000426155 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
SNX3-204ENST00000426155 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.02
SNX3-204ENST00000426155 STPG4Q8N801 248 aa8.71□□□□□ -1.02
SNX3-204ENST00000426155 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
SNX3-204ENST00000426155 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.02
SNX3-204ENST00000426155 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
SNX3-204ENST00000426155 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms