RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 CHCHD10Q8WYQ3 142 aaPredicted RBP3.36□□□□□ -1.87
VPS8-205ENST00000424721 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
VPS8-205ENST00000424721 GVQW2A0A096LPI5 108 aaPredicted RBP3.35□□□□□ -1.87
VPS8-205ENST00000424721 FAM231BA6NCW3 169 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 C1orf196B1AJZ1 125 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 APOMO95445 188 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 FGF6P10767 208 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 HNRNPA3P51991 378 aaKnown RBP3.35□□□□□ -1.87
VPS8-205ENST00000424721 GATD1Q8NB37 220 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 RPP21Q9H633 154 aaKnown RBP3.35□□□□□ -1.87
VPS8-205ENST00000424721 ST20Q9HBF5 79 aa3.35□□□□□ -1.87
VPS8-205ENST00000424721 A0A0J9YXV3 536 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 LINC00959A0A1B0GUT2 108 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 SDHAF1A6NFY7 115 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 PANO1I0J062 215 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 TCAPO15273 167 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 GATCO43716 136 aaKnown RBP3.34□□□□□ -1.87
VPS8-205ENST00000424721 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 MT3P25713 68 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 CTRLP40313 264 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 HIGD2BQ4VC39 106 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 LINC00242Q5T6M2 205 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 ZNF664Q8N3J9 261 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 MRAP2Q96G30 205 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 CARD19Q96LW7 228 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 CNFNQ9BYD5 112 aa3.34□□□□□ -1.87
VPS8-205ENST00000424721 IGLV4-69A0A075B6H9 119 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.33□□□□□ -1.88
VPS8-205ENST00000424721 TRBV6-5A0A0K0K1A5 114 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 IGKV2-29A2NJV5 120 aaPredicted RBP3.33□□□□□ -1.88
VPS8-205ENST00000424721 SMLR1H3BR10 107 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 COX7A2LO14548 114 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 BCL2P10415 239 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 FCER1GP30273 86 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 XCL1P47992 114 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 FOXA3P55318 350 aaPredicted RBP3.33□□□□□ -1.88
VPS8-205ENST00000424721 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 PRR3P79522 188 aaKnown RBP3.33□□□□□ -1.88
VPS8-205ENST00000424721 SLC51BQ86UW2 128 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 KIR2DL4Q99706 377 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 GFRA4Q9GZZ7 299 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
VPS8-205ENST00000424721 TRAV26-2A0A0B4J265 109 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 A0A1B0GUT8 65 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 G3V3Q6 166 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 TMEM250H0YL14 139 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 PPP1R2P9O14990 202 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 MT-ND6P03923 174 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 TMEM241Q24JQ0 296 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 FAM231DQ6ZW35 169 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 MRPL52Q86TS9 123 aaKnown RBP3.32□□□□□ -1.88
VPS8-205ENST00000424721 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 IMMP2LQ96T52 175 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
VPS8-205ENST00000424721 A0A096LNI7 61 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 TRBV27A0A0K0K1C4 114 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 C7orf77A4D0Y5 90 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 ESDP10768 282 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 LINC01547P58512 204 aaPredicted RBP3.31□□□□□ -1.88
VPS8-205ENST00000424721 DIRC1Q969H9 104 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 RPL39LQ96EH5 51 aaKnown RBP3.31□□□□□ -1.88
VPS8-205ENST00000424721 TMEM191AQ9H0A3 160 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
VPS8-205ENST00000424721 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
VPS8-205ENST00000424721 TRBV20OR9-2A0A075B6H5 130 aa3.3□□□□□ -1.88
VPS8-205ENST00000424721 LINC00862A6NCI5 91 aa3.3□□□□□ -1.88
VPS8-205ENST00000424721 RAB4AP20338 218 aa3.3□□□□□ -1.88
VPS8-205ENST00000424721 POLR2KP53803 58 aaKnown RBP3.3□□□□□ -1.88
VPS8-205ENST00000424721 OR10D4PQ8NGN7 298 aa3.3□□□□□ -1.88
VPS8-205ENST00000424721 TIMM21Q9BVV7 248 aa3.3□□□□□ -1.88
VPS8-205ENST00000424721 EIF5A2Q9GZV4 153 aaKnown RBP3.3□□□□□ -1.88
VPS8-205ENST00000424721 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
VPS8-205ENST00000424721 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 A0A1B0GW15 77 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 HIGD1CA8MV81 97 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 K7EN84 100 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 S100A8P05109 93 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 CEBPGP53567 150 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 C9orf116Q5BN46 136 aaPredicted RBP3.29□□□□□ -1.88
VPS8-205ENST00000424721 C1orf137Q5JT78 98 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 NUP35Q8NFH5 326 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 C20orf78Q9BR46 151 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 OSTCQ9NRP0 149 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 TMEM242Q9NWH2 141 aa3.29□□□□□ -1.88
VPS8-205ENST00000424721 A0A0U1RQV1 116 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 ZNF727A8MUV8 499 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 E9PLD3 99 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 F8W036 122 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 NDUFA1O15239 70 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 TSPAN13O95857 204 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 RAB5AP20339 215 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
VPS8-205ENST00000424721 TCTE3Q8IZS6 198 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 LINC00526Q96FQ7 95 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms