RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.68□□□□□ -1.82
LINC00458-201ENST00000423442 TRAV26-2A0A0B4J265 109 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 IGKV3OR2-268A0A0C4DH90 116 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 SDHAF1A6NFY7 115 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 F8W036 122 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 FCER1GP30273 86 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 KRTAP10-1P60331 282 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 DEFB104AQ8WTQ1 72 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 MRAP2Q96G30 205 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 KIR2DL4Q99706 377 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 TMEM191AQ9H0A3 160 aa3.68□□□□□ -1.82
LINC00458-201ENST00000423442 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 IGLV5-45A0A087WSX0 123 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 H0Y8G0 127 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 PPP1R2P9O14990 202 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 APCSP02743 223 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 CKS2P33552 79 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 RPL23P62829 140 aaKnown RBP3.67□□□□□ -1.82
LINC00458-201ENST00000423442 CLPSL2Q6UWE3 100 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 ISOC2Q96AB3 205 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
LINC00458-201ENST00000423442 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
LINC00458-201ENST00000423442 A0A087WZ39 114 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 LINC00862A6NCI5 91 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 TCAPO15273 167 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 MT-ND4LP03901 98 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 FGF6P10767 208 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 ZNF25P17030 456 aaPredicted RBP3.66□□□□□ -1.82
LINC00458-201ENST00000423442 RAB4AP20338 218 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 HAMPP81172 84 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 SS18Q15532 418 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 LINC00518Q8N0U6 118 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 NUP35Q8NFH5 326 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 OR5A1Q8NGJ0 315 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 V9GYV3 84 aa3.66□□□□□ -1.82
LINC00458-201ENST00000423442 IGLV4-60A0A075B6I1 120 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 SMIM27A0A1W2PRY6 76 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 PPBPP02775 128 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 RAB5AP20339 215 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 HBBP68871 147 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 FAM104BQ5XKR9 115 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 AMN1Q8IY45 258 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.83
LINC00458-201ENST00000423442 IGHV3-64A0A075B6Q5 118 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
LINC00458-201ENST00000423442 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
LINC00458-201ENST00000423442 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 C1orf196B1AJZ1 125 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 C9JQL5 133 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 CCL25O15444 150 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 POLR2KP53803 58 aaKnown RBP3.64□□□□□ -1.83
LINC00458-201ENST00000423442 DSCR10P59022 87 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 WFDC2Q14508 124 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 LINC01620Q4KN68 170 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 MRPL54Q6P161 138 aaKnown RBP3.64□□□□□ -1.83
LINC00458-201ENST00000423442 ZNF664Q8N3J9 261 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 CHAC1Q9BUX1 264 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 PKIGQ9Y2B9 76 aa3.64□□□□□ -1.83
LINC00458-201ENST00000423442 C7orf77A4D0Y5 90 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 TSHBP01222 138 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 RPS10P46783 165 aaKnown RBP3.63□□□□□ -1.83
LINC00458-201ENST00000423442 XCL1P47992 114 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
LINC00458-201ENST00000423442 Q6ZVQ6 151 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 C9orf163Q8N9P6 203 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 CHCHD10Q8WYQ3 142 aaPredicted RBP3.63□□□□□ -1.83
LINC00458-201ENST00000423442 RNF185Q96GF1 192 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 TMEM242Q9NWH2 141 aa3.63□□□□□ -1.83
LINC00458-201ENST00000423442 TRBV24-1A0A075B6N3 115 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 LINC00959A0A1B0GUT2 108 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 D6R8Y8 96 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 PHOX2AO14813 284 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 ESDP10768 282 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 G0S2P27469 103 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 NOTCH2NLQ7Z3S9 236 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 ATP5L2Q7Z4Y8 100 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 MRPL52Q86TS9 123 aaKnown RBP3.62□□□□□ -1.83
LINC00458-201ENST00000423442 ORMDL3Q8N138 153 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 PRELID3AQ96N28 172 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 CDC42SE2Q9NRR3 84 aa3.62□□□□□ -1.83
LINC00458-201ENST00000423442 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
LINC00458-201ENST00000423442 IGHV1-58A0A0C4DH39 117 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 COX7A2LO14548 114 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 APOMO95445 188 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 S100PP25815 95 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 CNBPP62633 177 aaKnown RBP3.61□□□□□ -1.83
LINC00458-201ENST00000423442 CLLU1Q5K131 121 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 UQCC3Q6UW78 93 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 Q6ZSA8 131 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 LINC00474Q9P2X8 69 aa3.61□□□□□ -1.83
LINC00458-201ENST00000423442 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms