RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CARD19Q96LW7 228 aa16.85■□□□□ 0.29
CDK9-202ENST00000421939 MYCBP2O75592 4640 aa16.84■□□□□ 0.29
CDK9-202ENST00000421939 MT-ND6P03923 174 aa16.84■□□□□ 0.29
CDK9-202ENST00000421939 NDUFA5Q16718 116 aa16.84■□□□□ 0.29
CDK9-202ENST00000421939 APOMO95445 188 aa16.83■□□□□ 0.28
CDK9-202ENST00000421939 PRSS3P2Q8NHM4 247 aa16.83■□□□□ 0.28
CDK9-202ENST00000421939 IGHV3OR16-9A0A0B4J2B5 98 aa16.82■□□□□ 0.28
CDK9-202ENST00000421939 SYCNQ0VAF6 134 aa16.82■□□□□ 0.28
CDK9-202ENST00000421939 FLG2Q5D862 2391 aaPredicted RBP16.81■□□□□ 0.28
CDK9-202ENST00000421939 IGLV4-69A0A075B6H9 119 aa16.81■□□□□ 0.28
CDK9-202ENST00000421939 TEX43Q6ZNM6 134 aa16.81■□□□□ 0.28
CDK9-202ENST00000421939 SVBPQ8N300 66 aa16.81■□□□□ 0.28
CDK9-202ENST00000421939 ALKBH7Q9BT30 221 aaPredicted RBP16.81■□□□□ 0.28
CDK9-202ENST00000421939 MRPL18Q9H0U6 180 aaKnown RBP16.81■□□□□ 0.28
CDK9-202ENST00000421939 PKIGQ9Y2B9 76 aa16.81■□□□□ 0.28
CDK9-202ENST00000421939 SNAPINO95295 136 aa16.8■□□□□ 0.28
CDK9-202ENST00000421939 Q6ZN92 141 aa16.8■□□□□ 0.28
CDK9-202ENST00000421939 DPH3Q96FX2 82 aa16.8■□□□□ 0.28
CDK9-202ENST00000421939 G0S2P27469 103 aa16.79■□□□□ 0.28
CDK9-202ENST00000421939 SPAG11BQ08648 103 aa16.79■□□□□ 0.28
CDK9-202ENST00000421939 FABP9Q0Z7S8 132 aa16.79■□□□□ 0.28
CDK9-202ENST00000421939 C2orf88Q9BSF0 95 aa16.79■□□□□ 0.28
CDK9-202ENST00000421939 A0A087WYN8 130 aa16.78■□□□□ 0.28
CDK9-202ENST00000421939 TGIF2-C20orf24A0A0A6YYL0 155 aa16.78■□□□□ 0.28
CDK9-202ENST00000421939 IGKV2-24A0A0C4DH68 120 aa16.78■□□□□ 0.28
CDK9-202ENST00000421939 IGIPA6NJ69 53 aa16.78■□□□□ 0.28
CDK9-202ENST00000421939 NPSP0C0P6 89 aa16.78■□□□□ 0.28
CDK9-202ENST00000421939 OR10D4PQ8NGN7 298 aa16.78■□□□□ 0.28
CDK9-202ENST00000421939 KRTAP10-4P60372 401 aaPredicted RBP16.77■□□□□ 0.28
CDK9-202ENST00000421939 LINC00242Q5T6M2 205 aa16.77■□□□□ 0.28
CDK9-202ENST00000421939 LINC00173Q6ZV60 143 aa16.77■□□□□ 0.28
CDK9-202ENST00000421939 C2orf48Q96LS8 159 aa16.77■□□□□ 0.28
CDK9-202ENST00000421939 CAMK2N2Q96S95 79 aa16.77■□□□□ 0.28
CDK9-202ENST00000421939 A0A096LNI7 61 aa16.76■□□□□ 0.27
CDK9-202ENST00000421939 UBE2D1P51668 147 aa16.76■□□□□ 0.27
CDK9-202ENST00000421939 Q6ZRU5 148 aa16.76■□□□□ 0.27
CDK9-202ENST00000421939 ORAOV1Q8WV07 137 aa16.76■□□□□ 0.27
CDK9-202ENST00000421939 AMELXQ99217 191 aa16.76■□□□□ 0.27
CDK9-202ENST00000421939 VCX2Q9H322 139 aa16.76■□□□□ 0.27
CDK9-202ENST00000421939 RPL37AP61513 92 aaKnown RBP16.75■□□□□ 0.27
CDK9-202ENST00000421939 MAJINQ3KP22 176 aa16.75■□□□□ 0.27
CDK9-202ENST00000421939 ZC2HC1BQ5TFG8 222 aa16.75■□□□□ 0.27
CDK9-202ENST00000421939 TOMM6Q96B49 74 aa16.75■□□□□ 0.27
CDK9-202ENST00000421939 PLAC8Q9NZF1 115 aa16.75■□□□□ 0.27
CDK9-202ENST00000421939 TIMM17AQ99595 171 aa16.74■□□□□ 0.27
CDK9-202ENST00000421939 PAPPA-AS1Q5QFB9 102 aa16.73■□□□□ 0.27
CDK9-202ENST00000421939 A0A087WZ39 114 aa16.72■□□□□ 0.27
CDK9-202ENST00000421939 LINC01546A6NGU7 62 aa16.72■□□□□ 0.27
CDK9-202ENST00000421939 LINC00474Q9P2X8 69 aa16.72■□□□□ 0.27
CDK9-202ENST00000421939 FA2HQ7L5A8 372 aa16.7■□□□□ 0.26
CDK9-202ENST00000421939 TRAPPC1Q9Y5R8 145 aa16.7■□□□□ 0.26
CDK9-202ENST00000421939 DMBT1Q9UGM3 2413 aaPredicted RBP16.69■□□□□ 0.26
CDK9-202ENST00000421939 LOC107984640A0A0U1RRK4 108 aa16.69■□□□□ 0.26
CDK9-202ENST00000421939 STPG4Q8N801 248 aa16.69■□□□□ 0.26
CDK9-202ENST00000421939 SMCO4Q9NRQ5 59 aa16.69■□□□□ 0.26
CDK9-202ENST00000421939 F8WDY8 70 aa16.68■□□□□ 0.26
CDK9-202ENST00000421939 ERASQ7Z444 233 aa16.68■□□□□ 0.26
CDK9-202ENST00000421939 SCGB3A1Q96QR1 104 aa16.68■□□□□ 0.26
CDK9-202ENST00000421939 LINC01549A6NIU2 74 aa16.67■□□□□ 0.26
CDK9-202ENST00000421939 PTTG1IPP53801 180 aa16.66■□□□□ 0.26
CDK9-202ENST00000421939 FAM19A3Q7Z5A8 133 aa16.66■□□□□ 0.26
CDK9-202ENST00000421939 LINC01561Q8N1V8 128 aa16.66■□□□□ 0.26
CDK9-202ENST00000421939 MRPL35Q9NZE8 188 aaKnown RBP16.66■□□□□ 0.26
CDK9-202ENST00000421939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.65■□□□□ 0.26
CDK9-202ENST00000421939 NDUFA1O15239 70 aa16.65■□□□□ 0.26
CDK9-202ENST00000421939 RNF151Q2KHN1 245 aa16.65■□□□□ 0.26
CDK9-202ENST00000421939 SEC11AP67812 179 aa16.64■□□□□ 0.25
CDK9-202ENST00000421939 GAGE2BQ13066 116 aa16.64■□□□□ 0.25
CDK9-202ENST00000421939 KIAA0087Q14695 138 aa16.63■□□□□ 0.25
CDK9-202ENST00000421939 C18orf32Q8TCD1 76 aa16.63■□□□□ 0.25
CDK9-202ENST00000421939 C7orf33Q8WU49 177 aa16.63■□□□□ 0.25
CDK9-202ENST00000421939 YPEL4Q96NS1 127 aa16.63■□□□□ 0.25
CDK9-202ENST00000421939 HERC1Q15751 4861 aa16.63■□□□□ 0.25
CDK9-202ENST00000421939 A0A0J9YXV3 536 aa16.62■□□□□ 0.25
CDK9-202ENST00000421939 RPL18AQ02543 176 aaKnown RBP16.62■□□□□ 0.25
CDK9-202ENST00000421939 HERVK_113P63121 156 aa16.61■□□□□ 0.25
CDK9-202ENST00000421939 C10orf25Q5T742 122 aa16.61■□□□□ 0.25
CDK9-202ENST00000421939 UNQ6190/PRO20217Q6UXQ8 127 aa16.6■□□□□ 0.25
CDK9-202ENST00000421939 GEMIN7Q9H840 131 aaKnown RBP16.6■□□□□ 0.25
CDK9-202ENST00000421939 PKHD1L1Q86WI1 4243 aa16.6■□□□□ 0.25
CDK9-202ENST00000421939 C6orf48Q9UBA6 75 aa16.59■□□□□ 0.25
CDK9-202ENST00000421939 URB1-AS1Q96HZ7 61 aa16.58■□□□□ 0.24
CDK9-202ENST00000421939 CDKN2A-AS1Q9UH64 79 aa16.58■□□□□ 0.24
CDK9-202ENST00000421939 LINC00614P0C842 121 aa16.56■□□□□ 0.24
CDK9-202ENST00000421939 HNRNPA3P51991 378 aaKnown RBP16.56■□□□□ 0.24
CDK9-202ENST00000421939 CBLN2Q8IUK8 224 aa16.56■□□□□ 0.24
CDK9-202ENST00000421939 PRSS2P07478 247 aa16.55■□□□□ 0.24
CDK9-202ENST00000421939 C2orf82Q6UX34 121 aa16.55■□□□□ 0.24
CDK9-202ENST00000421939 SLC7A5P1Q8MH63 180 aa16.55■□□□□ 0.24
CDK9-202ENST00000421939 PACRGQ96M98 296 aaPredicted RBP16.55■□□□□ 0.24
CDK9-202ENST00000421939 CST9LQ9H4G1 147 aa16.55■□□□□ 0.24
CDK9-202ENST00000421939 LRP1Q07954 4544 aaKnown RBP16.55■□□□□ 0.24
CDK9-202ENST00000421939 A0A096LNJ9 63 aa16.54■□□□□ 0.24
CDK9-202ENST00000421939 PMVKQ15126 192 aa16.54■□□□□ 0.24
CDK9-202ENST00000421939 TOMM7Q9P0U1 55 aa16.54■□□□□ 0.24
CDK9-202ENST00000421939 TRBV30A0A0K0K1B3 111 aa16.53■□□□□ 0.24
CDK9-202ENST00000421939 TINCRA0A1B0GVN0 87 aa16.53■□□□□ 0.24
CDK9-202ENST00000421939 HBDP02042 147 aa16.53■□□□□ 0.24
CDK9-202ENST00000421939 TLX1NBP0CAT3 122 aa16.53■□□□□ 0.24
CDK9-202ENST00000421939 LINC00469Q8N7U9 141 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms