RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 A0A1B0GXF2 115 aa11.64□□□□□ -0.55
VARS2-202ENST00000421263 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
VARS2-202ENST00000421263 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
VARS2-202ENST00000421263 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
VARS2-202ENST00000421263 SMIM2Q9BVW6 85 aa11.64□□□□□ -0.55
VARS2-202ENST00000421263 D6R8Y8 96 aa11.63□□□□□ -0.55
VARS2-202ENST00000421263 SPAG11BQ08648 103 aa11.63□□□□□ -0.55
VARS2-202ENST00000421263 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
VARS2-202ENST00000421263 SPANXA1Q9NS26 97 aa11.63□□□□□ -0.55
VARS2-202ENST00000421263 F8W036 122 aa11.62□□□□□ -0.55
VARS2-202ENST00000421263 F8WDY8 70 aa11.62□□□□□ -0.55
VARS2-202ENST00000421263 S100A8P05109 93 aa11.62□□□□□ -0.55
VARS2-202ENST00000421263 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
VARS2-202ENST00000421263 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
VARS2-202ENST00000421263 PSORS1C2Q9UIG4 136 aa11.62□□□□□ -0.55
VARS2-202ENST00000421263 NPYP01303 97 aa11.61□□□□□ -0.55
VARS2-202ENST00000421263 PPBPP02775 128 aa11.61□□□□□ -0.55
VARS2-202ENST00000421263 HBBP68871 147 aa11.61□□□□□ -0.55
VARS2-202ENST00000421263 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
VARS2-202ENST00000421263 ORAOV1Q8WV07 137 aa11.59□□□□□ -0.55
VARS2-202ENST00000421263 TLX1NBP0CAT3 122 aa11.58□□□□□ -0.56
VARS2-202ENST00000421263 PHF5AQ7RTV0 110 aaKnown RBP11.58□□□□□ -0.56
VARS2-202ENST00000421263 C10orf25Q5T742 122 aa11.57□□□□□ -0.56
VARS2-202ENST00000421263 IMMP2LQ96T52 175 aa11.57□□□□□ -0.56
VARS2-202ENST00000421263 PYGO1Q9Y3Y4 419 aa11.57□□□□□ -0.56
VARS2-202ENST00000421263 PRSS47A8MTI9 375 aa11.56□□□□□ -0.56
VARS2-202ENST00000421263 NDUFA1O15239 70 aa11.56□□□□□ -0.56
VARS2-202ENST00000421263 MT-ND6P03923 174 aa11.56□□□□□ -0.56
VARS2-202ENST00000421263 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
VARS2-202ENST00000421263 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
VARS2-202ENST00000421263 KIAA0087Q14695 138 aa11.55□□□□□ -0.56
VARS2-202ENST00000421263 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
VARS2-202ENST00000421263 TMEM136Q6ZRR5 245 aa11.55□□□□□ -0.56
VARS2-202ENST00000421263 ORMDL3Q8N138 153 aa11.55□□□□□ -0.56
VARS2-202ENST00000421263 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
VARS2-202ENST00000421263 A0A087WZ39 114 aa11.54□□□□□ -0.56
VARS2-202ENST00000421263 RAB5AP20339 215 aa11.54□□□□□ -0.56
VARS2-202ENST00000421263 C1orf137Q5JT78 98 aa11.54□□□□□ -0.56
VARS2-202ENST00000421263 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
VARS2-202ENST00000421263 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
VARS2-202ENST00000421263 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
VARS2-202ENST00000421263 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
VARS2-202ENST00000421263 FAM168BA1KXE4 195 aa11.52□□□□□ -0.57
VARS2-202ENST00000421263 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.57
VARS2-202ENST00000421263 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
VARS2-202ENST00000421263 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
VARS2-202ENST00000421263 KRTAP7-1Q8IUC3 87 aa11.5□□□□□ -0.57
VARS2-202ENST00000421263 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
VARS2-202ENST00000421263 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
VARS2-202ENST00000421263 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
VARS2-202ENST00000421263 UBE2D1P51668 147 aa11.48□□□□□ -0.57
VARS2-202ENST00000421263 TRBV30A0A0K0K1B3 111 aa11.47□□□□□ -0.57
VARS2-202ENST00000421263 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
VARS2-202ENST00000421263 DIRC1Q969H9 104 aa11.47□□□□□ -0.57
VARS2-202ENST00000421263 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
VARS2-202ENST00000421263 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
VARS2-202ENST00000421263 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
VARS2-202ENST00000421263 Q8N8P6 123 aa11.46□□□□□ -0.57
VARS2-202ENST00000421263 AMELXQ99217 191 aa11.46□□□□□ -0.57
VARS2-202ENST00000421263 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
VARS2-202ENST00000421263 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
VARS2-202ENST00000421263 PNRC1Q12796 327 aaPredicted RBP11.45□□□□□ -0.58
VARS2-202ENST00000421263 C2orf82Q6UX34 121 aa11.45□□□□□ -0.58
VARS2-202ENST00000421263 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
VARS2-202ENST00000421263 FAM19A5Q7Z5A7 132 aaPredicted RBP11.45□□□□□ -0.58
VARS2-202ENST00000421263 H0Y9J4 135 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 NPSP0C0P6 89 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 C2orf66Q6UXQ4 117 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 ANAPC16Q96DE5 110 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 LPAP08519 4548 aa11.44□□□□□ -0.58
VARS2-202ENST00000421263 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
VARS2-202ENST00000421263 PRR26Q8N8Z3 221 aa11.43□□□□□ -0.58
VARS2-202ENST00000421263 IGIPA6NJ69 53 aa11.42□□□□□ -0.58
VARS2-202ENST00000421263 K7EMI3 77 aa11.42□□□□□ -0.58
VARS2-202ENST00000421263 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
VARS2-202ENST00000421263 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
VARS2-202ENST00000421263 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
VARS2-202ENST00000421263 VCX2Q9H322 139 aa11.42□□□□□ -0.58
VARS2-202ENST00000421263 M0QXV9 152 aa11.41□□□□□ -0.58
VARS2-202ENST00000421263 ORMDL2Q53FV1 153 aa11.41□□□□□ -0.58
VARS2-202ENST00000421263 PACRGQ96M98 296 aaPredicted RBP11.41□□□□□ -0.58
VARS2-202ENST00000421263 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
VARS2-202ENST00000421263 Q6ZN92 141 aa11.4□□□□□ -0.58
VARS2-202ENST00000421263 RAB14P61106 215 aa11.38□□□□□ -0.59
VARS2-202ENST00000421263 Q8IZM0 81 aa11.38□□□□□ -0.59
VARS2-202ENST00000421263 NXT2Q9NPJ8 142 aaKnown RBP11.38□□□□□ -0.59
VARS2-202ENST00000421263 IGLV1-50A0A075B6I6 118 aa11.37□□□□□ -0.59
VARS2-202ENST00000421263 UBE2BP63146 152 aa11.37□□□□□ -0.59
VARS2-202ENST00000421263 PRSS2P07478 247 aa11.36□□□□□ -0.59
VARS2-202ENST00000421263 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
VARS2-202ENST00000421263 TOMM7Q9P0U1 55 aa11.35□□□□□ -0.59
VARS2-202ENST00000421263 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
VARS2-202ENST00000421263 G0S2P27469 103 aa11.34□□□□□ -0.59
VARS2-202ENST00000421263 CKS1BP61024 79 aa11.34□□□□□ -0.59
VARS2-202ENST00000421263 HERVK_113P63121 156 aa11.34□□□□□ -0.59
VARS2-202ENST00000421263 SEC11AP67812 179 aa11.34□□□□□ -0.59
VARS2-202ENST00000421263 PAPPA-AS1Q5QFB9 102 aa11.34□□□□□ -0.59
VARS2-202ENST00000421263 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms