RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 HERVK_113P63121 156 aa10.69□□□□□ -0.7
SEMA4D-204ENST00000420101 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
SEMA4D-204ENST00000420101 OR13C6PQ8NH95 151 aa10.69□□□□□ -0.7
SEMA4D-204ENST00000420101 CLEC2BQ92478 149 aa10.69□□□□□ -0.7
SEMA4D-204ENST00000420101 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
SEMA4D-204ENST00000420101 IGLV1-51P01701 117 aa10.68□□□□□ -0.7
SEMA4D-204ENST00000420101 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
SEMA4D-204ENST00000420101 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
SEMA4D-204ENST00000420101 CMC4P56277 68 aaPredicted RBP10.68□□□□□ -0.7
SEMA4D-204ENST00000420101 ZNF415Q09FC8 603 aa10.68□□□□□ -0.7
SEMA4D-204ENST00000420101 IGHV3-64A0A075B6Q5 118 aa10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 NDUFA1O15239 70 aa10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 HTN1P15515 57 aa10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 HIST1H4AP62805 103 aaKnown RBP10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 JPT2Q9H910 190 aa10.67□□□□□ -0.7
SEMA4D-204ENST00000420101 F8P00451 2351 aa10.66□□□□□ -0.7
SEMA4D-204ENST00000420101 TIRAPP58753 221 aa10.65□□□□□ -0.7
SEMA4D-204ENST00000420101 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.7
SEMA4D-204ENST00000420101 FAM74A4Q5TZK3 123 aa10.65□□□□□ -0.7
SEMA4D-204ENST00000420101 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.7
SEMA4D-204ENST00000420101 NF1P21359 2839 aa10.65□□□□□ -0.7
SEMA4D-204ENST00000420101 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 SMIM9A6NGZ8 99 aa10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 GAGE2AQ6NT46 116 aa10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.71
SEMA4D-204ENST00000420101 SETD2Q9BYW2 2564 aaPredicted RBP10.63□□□□□ -0.71
SEMA4D-204ENST00000420101 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
SEMA4D-204ENST00000420101 TMEM258P61165 79 aa10.63□□□□□ -0.71
SEMA4D-204ENST00000420101 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
SEMA4D-204ENST00000420101 C2CD3Q4AC94 2353 aa10.63□□□□□ -0.71
SEMA4D-204ENST00000420101 BAHCC1Q9P281 2608 aa10.62□□□□□ -0.71
SEMA4D-204ENST00000420101 SETXQ7Z333 2677 aaKnown RBP10.62□□□□□ -0.71
SEMA4D-204ENST00000420101 A8MTW9 85 aa10.62□□□□□ -0.71
SEMA4D-204ENST00000420101 INSP01308 110 aa10.62□□□□□ -0.71
SEMA4D-204ENST00000420101 KRTAP24-1Q3LI83 254 aa10.62□□□□□ -0.71
SEMA4D-204ENST00000420101 XCL2Q9UBD3 114 aa10.62□□□□□ -0.71
SEMA4D-204ENST00000420101 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 SMCR5Q8TEV8 140 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 C2orf48Q96LS8 159 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 WFDC10AQ9H1F0 79 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 SORL1Q92673 2214 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 DAZ2Q13117 558 aaKnown RBP10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 LINC00308Q8TCZ7 52 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 FAM104AQ969W3 186 aa10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
SEMA4D-204ENST00000420101 BAALC-AS2P0C853 105 aa10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 RBMY1A1P0DJD3 496 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 RBMY1CP0DJD4 496 aa10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 RBMY1FQ15415 496 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 CEMP1Q6PRD7 247 aaPredicted RBP10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 C3orf56Q8N813 242 aa10.6□□□□□ -0.71
SEMA4D-204ENST00000420101 FAM19A3Q7Z5A8 133 aa10.59□□□□□ -0.71
SEMA4D-204ENST00000420101 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
SEMA4D-204ENST00000420101 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
SEMA4D-204ENST00000420101 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-204ENST00000420101 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
SEMA4D-204ENST00000420101 Q6JHZ5 121 aa10.57□□□□□ -0.72
SEMA4D-204ENST00000420101 PRM2P04554 102 aa10.56□□□□□ -0.72
SEMA4D-204ENST00000420101 SERP2Q8N6R1 65 aa10.56□□□□□ -0.72
SEMA4D-204ENST00000420101 DEFB104AQ8WTQ1 72 aa10.56□□□□□ -0.72
SEMA4D-204ENST00000420101 C19orf73Q9NVV2 129 aa10.56□□□□□ -0.72
SEMA4D-204ENST00000420101 TRAV13-2A0A0B4J235 113 aa10.55□□□□□ -0.72
SEMA4D-204ENST00000420101 PRIMA1Q86XR5 153 aa10.55□□□□□ -0.72
SEMA4D-204ENST00000420101 MALP21145 153 aa10.54□□□□□ -0.72
SEMA4D-204ENST00000420101 RPL28P46779 137 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-204ENST00000420101 CHCHD7Q9BUK0 85 aa10.54□□□□□ -0.72
SEMA4D-204ENST00000420101 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
SEMA4D-204ENST00000420101 NDUFC2-KCTD14E9PQ53 114 aa10.53□□□□□ -0.72
SEMA4D-204ENST00000420101 NPC2P61916 151 aa10.53□□□□□ -0.72
SEMA4D-204ENST00000420101 JMJD1CQ15652 2540 aa10.52□□□□□ -0.72
SEMA4D-204ENST00000420101 C1orf158Q8N1D5 194 aa10.52□□□□□ -0.73
SEMA4D-204ENST00000420101 H0YGX0 51 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 DNAL4O96015 105 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 CDKN2A-AS1Q9UH64 79 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 DPH3Q96FX2 82 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 Q9H8V8 135 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 C22orf24Q9Y442 160 aa10.51□□□□□ -0.73
SEMA4D-204ENST00000420101 S100A7L2Q5SY68 101 aa10.5□□□□□ -0.73
SEMA4D-204ENST00000420101 OBSCN-AS1Q96MR7 158 aa10.5□□□□□ -0.73
SEMA4D-204ENST00000420101 hADV29S1A0JD25 119 aa10.48□□□□□ -0.73
SEMA4D-204ENST00000420101 ATP5EP2Q5VTU8 51 aa10.48□□□□□ -0.73
SEMA4D-204ENST00000420101 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
SEMA4D-204ENST00000420101 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
SEMA4D-204ENST00000420101 A8MZ25 164 aa10.47□□□□□ -0.73
SEMA4D-204ENST00000420101 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-204ENST00000420101 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
SEMA4D-204ENST00000420101 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-204ENST00000420101 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
SEMA4D-204ENST00000420101 IGHV3-53P01767 116 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms