RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 IGHV1-3A0A0C4DH29 117 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 TRBV7-4A0A0J9YYF1 115 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 TMEM256-PLSCR3K7ERE1 68 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 UBE2AP49459 152 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 APOC4P55056 127 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 TMEM254Q8TBM7 123 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 RMI2Q96E14 147 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 DEFB127Q9H1M4 99 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 SNURFQ9Y675 71 aa2.26□□□□□ -2.05
SDCBPP3-201ENST00000419629 KIAA0100Q14667 2235 aaKnown RBP2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 TTC28Q96AY4 2481 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGLV11-55A0A075B6I3 123 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 C5orf67F2Z3F1 127 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGLV1-47P01700 117 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGF1P05019 195 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 LINC00315P59091 139 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 NREPQ16612 68 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 C16orf74Q96GX8 76 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 ZNF702PQ9H963 129 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 CABIN1Q9Y6J0 2220 aa2.25□□□□□ -2.05
SDCBPP3-201ENST00000419629 PRRC2BQ5JSZ5 2229 aaKnown RBP2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 ZNF407Q9C0G0 2248 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 LOC110117498A0A087WWA1 95 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 NCR3O14931 201 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 LECT2O14960 151 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 PRR4Q16378 134 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 MIR7-3HGQ8N6C7 128 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 Q8N6K4 173 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 ZFAND2AQ8N6M9 145 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 ZNF625Q96I27 306 aaPredicted RBP2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 UBE2E2Q96LR5 201 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 BPESC1Q9GZL8 116 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 ZNRD1Q9P1U0 126 aa2.24□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGLV3-9A0A075B6K5 115 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 hDV103S1A0JD37 113 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 PINLYPA6NC86 204 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 M0QY20 66 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 M0R378 163 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 ZNF73O43830 326 aaPredicted RBP2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGHV3-23P01764 117 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 CTSGP08311 255 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 APELAP0DMC3 54 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGHV1-8P0DP01 117 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 RNASE3P12724 160 aaKnown RBP2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 CCL3L1P16619 93 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 ATP11AUNQ6ZP68 121 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 LCA10Q71F78 164 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 C6orf223Q8N319 242 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 WFDC9Q8NEX5 89 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 LINC01560Q8TB33 94 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 SMIM11BQ8TCY0 68 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 ITLN2Q8WWU7 325 aaPredicted RBP2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 TTTY12Q9BZ98 90 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 CYP4F30PQ9H0H9 118 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 LINC00588Q9Y4M8 146 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 CACNA1BQ00975 2339 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 ESPL1Q14674 2120 aa2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 RAI1Q7Z5J4 1906 aaPredicted RBP2.23□□□□□ -2.05
SDCBPP3-201ENST00000419629 NCOR1O75376 2440 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 KNTC1P50748 2209 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGHV3-72A0A0B4J1Y9 119 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 IGKV2-29A2NJV5 120 aaPredicted RBP2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 BPY2O14599 106 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 PRB2P02812 416 aaPredicted RBP2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 PRB4P10163 310 aaPredicted RBP2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 HAMPP81172 84 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 FAM229BQ4G0N7 80 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 PRR9Q5T870 116 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 Q6ZS52 159 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 C7orf65Q6ZTY9 151 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 FAM19A3Q7Z5A8 133 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 DEFB108BQ8NET1 73 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 NPBQ8NG41 125 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 LIMD2Q9BT23 127 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 SND1-IT1Q9HBX3 110 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 KMT2BQ9UMN6 2715 aaPredicted RBP2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 MYO7AQ13402 2215 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 RTTNQ86VV8 2226 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 DIDO1Q9BTC0 2240 aaKnown RBP2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 DSCAMO60469 2012 aa2.22□□□□□ -2.05
SDCBPP3-201ENST00000419629 MUC6Q6W4X9 2439 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 CACNA1GO43497 2377 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGHV1OR15-1A0A075B7D0 117 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 TRAV22A0A0B4J277 110 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 C8orf87E5RJ46 101 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 NDUFB1O75438 58 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 IGHV1-46P01743 117 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 RP1P56715 2156 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 KLK9Q2XQG4 91 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 FAM74A4Q5TZK3 123 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 UNQ9165/PRO28630Q6UXU0 137 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 Q6ZQT0 140 aa2.21□□□□□ -2.06
SDCBPP3-201ENST00000419629 LINC00269Q8N2A0 174 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms