RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MRPL51Q4U2R6 128 aaKnown RBP4.48□□□□□ -1.69
HMGN1-205ENST00000419378 Q5VSD8 79 aa4.48□□□□□ -1.69
HMGN1-205ENST00000419378 MRPL54Q6P161 138 aaKnown RBP4.48□□□□□ -1.69
HMGN1-205ENST00000419378 SRRM2Q9UQ35 2752 aaKnown RBP4.48□□□□□ -1.69
HMGN1-205ENST00000419378 C7orf77A4D0Y5 90 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 LINC00862A6NCI5 91 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 D6R8Y8 96 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 SMR3BP02814 79 aaPredicted RBP4.47□□□□□ -1.69
HMGN1-205ENST00000419378 CKS2P33552 79 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 ATP5L2Q7Z4Y8 100 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 TMEM101Q96IK0 257 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 BTF3L4Q96K17 158 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 HERC1Q15751 4861 aa4.47□□□□□ -1.69
HMGN1-205ENST00000419378 TRBV24-1A0A075B6N3 115 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 F8W036 122 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 FCER1GP30273 86 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 CNBPP62633 177 aaKnown RBP4.46□□□□□ -1.7
HMGN1-205ENST00000419378 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 MRPL52Q86TS9 123 aaKnown RBP4.46□□□□□ -1.7
HMGN1-205ENST00000419378 OR5A1Q8NGJ0 315 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 CHCHD10Q8WYQ3 142 aaPredicted RBP4.46□□□□□ -1.7
HMGN1-205ENST00000419378 C20orf78Q9BR46 151 aa4.46□□□□□ -1.7
HMGN1-205ENST00000419378 A0A087WYN8 130 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 NPYP01303 97 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 RPL32P62910 135 aaKnown RBP4.45□□□□□ -1.7
HMGN1-205ENST00000419378 UQCC3Q6UW78 93 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 C15orf56Q8N910 161 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 KIR2DL4Q99706 377 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 CHAC1Q9BUX1 264 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 SMIM2Q9BVW6 85 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
HMGN1-205ENST00000419378 LINC00959A0A1B0GUT2 108 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 TMEM218A2RU14 115 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 PPBPP02775 128 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 XCL1P47992 114 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 C9orf163Q8N9P6 203 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 CIRBP-AS1Q8TBR5 109 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 UBE2D4Q9Y2X8 147 aa4.44□□□□□ -1.7
HMGN1-205ENST00000419378 FLG2Q5D862 2391 aaPredicted RBP4.43□□□□□ -1.7
HMGN1-205ENST00000419378 GVQW2A0A096LPI5 108 aaPredicted RBP4.43□□□□□ -1.7
HMGN1-205ENST00000419378 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
HMGN1-205ENST00000419378 PHOX2AO14813 284 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 TCAPO15273 167 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 CCL25O15444 150 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 INAFM2P0DMQ5 153 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 SMAGPQ0VAQ4 97 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 HIGD2BQ4VC39 106 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 TMEM136Q6ZRR5 245 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 Q6ZUT4 128 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 PRELID3AQ96N28 172 aa4.43□□□□□ -1.7
HMGN1-205ENST00000419378 CSDC2Q9Y534 153 aaKnown RBP4.43□□□□□ -1.7
HMGN1-205ENST00000419378 IGHV3-64A0A075B6Q5 118 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 RPL39P62891 51 aaKnown RBP4.42□□□□□ -1.7
HMGN1-205ENST00000419378 SS18Q15532 418 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
HMGN1-205ENST00000419378 CD164L2Q6UWJ8 174 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 SDIM1Q6ZPB5 146 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 COMMD7Q86VX2 200 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 IMMP2LQ96T52 175 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 TIMM21Q9BVV7 248 aa4.42□□□□□ -1.7
HMGN1-205ENST00000419378 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
HMGN1-205ENST00000419378 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 TRAV13-1A0A0B4J241 112 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 PANO1I0J062 215 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 FAM104AQ969W3 186 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 SEC11CQ9BY50 192 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 SPANXA1Q9NS26 97 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 LAMTOR2Q9Y2Q5 125 aa4.41□□□□□ -1.7
HMGN1-205ENST00000419378 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
HMGN1-205ENST00000419378 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
HMGN1-205ENST00000419378 LOC389332A0A1B0GUA5 103 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 C1orf196B1AJZ1 125 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 COX7A2LO14548 114 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 CHTF8P0CG12 524 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 CFC1BP0CG36 223 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 CFC1P0CG37 223 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 RAB5AP20339 215 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 CIRBPQ14011 172 aaKnown RBP4.4□□□□□ -1.71
HMGN1-205ENST00000419378 MAP1LC3AQ9H492 121 aa4.4□□□□□ -1.71
HMGN1-205ENST00000419378 TRAV9-1A0A075B6T8 112 aa4.39□□□□□ -1.71
HMGN1-205ENST00000419378 IFI27P40305 119 aaPredicted RBP4.39□□□□□ -1.71
HMGN1-205ENST00000419378 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
HMGN1-205ENST00000419378 MRPS36P82909 103 aaKnown RBP4.39□□□□□ -1.71
HMGN1-205ENST00000419378 COX6A2Q02221 97 aa4.39□□□□□ -1.71
HMGN1-205ENST00000419378 C10orf91Q5T1B1 145 aa4.39□□□□□ -1.71
HMGN1-205ENST00000419378 Q8N8P6 123 aa4.39□□□□□ -1.71
HMGN1-205ENST00000419378 SPACA4Q8TDM5 124 aa4.39□□□□□ -1.71
HMGN1-205ENST00000419378 LINC00526Q96FQ7 95 aa4.39□□□□□ -1.71
HMGN1-205ENST00000419378 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
HMGN1-205ENST00000419378 ALKBH7Q9BT30 221 aaPredicted RBP4.39□□□□□ -1.71
HMGN1-205ENST00000419378 IGLV4-69A0A075B6H9 119 aa4.38□□□□□ -1.71
HMGN1-205ENST00000419378 S100PP25815 95 aa4.38□□□□□ -1.71
HMGN1-205ENST00000419378 C5orf38Q86SI9 138 aa4.38□□□□□ -1.71
HMGN1-205ENST00000419378 CARD19Q96LW7 228 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms