RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 A0A087WYN8 130 aa9.76□□□□□ -0.85
NUP50-204ENST00000417702 K7EMI3 77 aa9.76□□□□□ -0.85
NUP50-204ENST00000417702 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
NUP50-204ENST00000417702 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
NUP50-204ENST00000417702 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
NUP50-204ENST00000417702 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
NUP50-204ENST00000417702 TRAPPC1Q9Y5R8 145 aa9.76□□□□□ -0.85
NUP50-204ENST00000417702 IFI27P40305 119 aaPredicted RBP9.75□□□□□ -0.85
NUP50-204ENST00000417702 LINC00526Q96FQ7 95 aa9.75□□□□□ -0.85
NUP50-204ENST00000417702 CARD19Q96LW7 228 aa9.75□□□□□ -0.85
NUP50-204ENST00000417702 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
NUP50-204ENST00000417702 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
NUP50-204ENST00000417702 SYCNQ0VAF6 134 aa9.74□□□□□ -0.85
NUP50-204ENST00000417702 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
NUP50-204ENST00000417702 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
NUP50-204ENST00000417702 APOMO95445 188 aa9.73□□□□□ -0.85
NUP50-204ENST00000417702 G0S2P27469 103 aa9.73□□□□□ -0.85
NUP50-204ENST00000417702 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
NUP50-204ENST00000417702 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
NUP50-204ENST00000417702 PLAC8Q9NZF1 115 aa9.73□□□□□ -0.85
NUP50-204ENST00000417702 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
NUP50-204ENST00000417702 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
NUP50-204ENST00000417702 YPEL4Q96NS1 127 aa9.72□□□□□ -0.85
NUP50-204ENST00000417702 LINC00474Q9P2X8 69 aa9.72□□□□□ -0.85
NUP50-204ENST00000417702 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
NUP50-204ENST00000417702 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
NUP50-204ENST00000417702 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.86
NUP50-204ENST00000417702 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
NUP50-204ENST00000417702 C2orf66Q6UXQ4 117 aa9.71□□□□□ -0.86
NUP50-204ENST00000417702 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
NUP50-204ENST00000417702 A0A096LNI7 61 aa9.7□□□□□ -0.86
NUP50-204ENST00000417702 STPG4Q8N801 248 aa9.7□□□□□ -0.86
NUP50-204ENST00000417702 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
NUP50-204ENST00000417702 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
NUP50-204ENST00000417702 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
NUP50-204ENST00000417702 FA2HQ7L5A8 372 aa9.69□□□□□ -0.86
NUP50-204ENST00000417702 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
NUP50-204ENST00000417702 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
NUP50-204ENST00000417702 HERC1Q15751 4861 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 IGLV4-3A0A075B6K6 122 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 LINC01549A6NIU2 74 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 OXTP01178 125 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 NPSP0C0P6 89 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 Q6ZRU5 148 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 OR10D4PQ8NGN7 298 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
NUP50-204ENST00000417702 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
NUP50-204ENST00000417702 Q6ZN92 141 aa9.66□□□□□ -0.86
NUP50-204ENST00000417702 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
NUP50-204ENST00000417702 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
NUP50-204ENST00000417702 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
NUP50-204ENST00000417702 TOMM6Q96B49 74 aa9.66□□□□□ -0.86
NUP50-204ENST00000417702 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
NUP50-204ENST00000417702 RAB5BP61020 215 aa9.65□□□□□ -0.86
NUP50-204ENST00000417702 GAGE2BQ13066 116 aa9.65□□□□□ -0.86
NUP50-204ENST00000417702 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
NUP50-204ENST00000417702 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
NUP50-204ENST00000417702 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
NUP50-204ENST00000417702 F8WDY8 70 aa9.64□□□□□ -0.87
NUP50-204ENST00000417702 LINC00614P0C842 121 aa9.64□□□□□ -0.87
NUP50-204ENST00000417702 PTTG1IPP53801 180 aa9.64□□□□□ -0.87
NUP50-204ENST00000417702 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
NUP50-204ENST00000417702 VCX2Q9H322 139 aa9.64□□□□□ -0.87
NUP50-204ENST00000417702 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
NUP50-204ENST00000417702 ERASQ7Z444 233 aa9.63□□□□□ -0.87
NUP50-204ENST00000417702 SCGB3A1Q96QR1 104 aa9.63□□□□□ -0.87
NUP50-204ENST00000417702 NDUFA1O15239 70 aa9.62□□□□□ -0.87
NUP50-204ENST00000417702 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
NUP50-204ENST00000417702 AMELXQ99217 191 aa9.62□□□□□ -0.87
NUP50-204ENST00000417702 A0A087WZ39 114 aa9.61□□□□□ -0.87
NUP50-204ENST00000417702 COLCA2A8K830 154 aa9.61□□□□□ -0.87
NUP50-204ENST00000417702 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
NUP50-204ENST00000417702 TRGC2P03986 189 aa9.61□□□□□ -0.87
NUP50-204ENST00000417702 RPL18AQ02543 176 aaKnown RBP9.61□□□□□ -0.87
NUP50-204ENST00000417702 MRPL35Q9NZE8 188 aaKnown RBP9.61□□□□□ -0.87
NUP50-204ENST00000417702 UBE2D1P51668 147 aa9.6□□□□□ -0.87
NUP50-204ENST00000417702 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
NUP50-204ENST00000417702 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
NUP50-204ENST00000417702 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
NUP50-204ENST00000417702 ZC2HC1BQ5TFG8 222 aa9.59□□□□□ -0.87
NUP50-204ENST00000417702 LINC00173Q6ZV60 143 aa9.59□□□□□ -0.87
NUP50-204ENST00000417702 SCO1O75880 301 aa9.58□□□□□ -0.88
NUP50-204ENST00000417702 HBDP02042 147 aa9.58□□□□□ -0.88
NUP50-204ENST00000417702 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
NUP50-204ENST00000417702 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
NUP50-204ENST00000417702 SEC11AP67812 179 aa9.57□□□□□ -0.88
NUP50-204ENST00000417702 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
NUP50-204ENST00000417702 BAGE3Q86Y29 109 aa9.57□□□□□ -0.88
NUP50-204ENST00000417702 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
NUP50-204ENST00000417702 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
NUP50-204ENST00000417702 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
NUP50-204ENST00000417702 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
NUP50-204ENST00000417702 FAM19A3Q7Z5A8 133 aa9.56□□□□□ -0.88
NUP50-204ENST00000417702 A0A096LNJ9 63 aa9.55□□□□□ -0.88
NUP50-204ENST00000417702 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
NUP50-204ENST00000417702 PMCHL1Q16048 86 aa9.55□□□□□ -0.88
NUP50-204ENST00000417702 Q6ZRP5 223 aa9.55□□□□□ -0.88
NUP50-204ENST00000417702 C6orf48Q9UBA6 75 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms