RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 Q6ZTI0 123 aa4.51□□□□□ -1.69
CCNT1-202ENST00000417344 TM2D3Q9BRN9 247 aa4.51□□□□□ -1.69
CCNT1-202ENST00000417344 LOC400499M0QZD8 3231 aa4.51□□□□□ -1.69
CCNT1-202ENST00000417344 WNK2Q9Y3S1 2297 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 LINC00158P58513 81 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 CD164Q04900 197 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 RETNQ9HD89 108 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 LY6G6DO95868 133 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 HAMPP81172 84 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 Q8N814 137 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 TMEM254Q8TBM7 123 aa4.5□□□□□ -1.69
CCNT1-202ENST00000417344 CXCL6P80162 114 aa4.49□□□□□ -1.69
CCNT1-202ENST00000417344 Q6ZVQ6 151 aa4.49□□□□□ -1.69
CCNT1-202ENST00000417344 C5orf56Q8N8D9 126 aa4.49□□□□□ -1.69
CCNT1-202ENST00000417344 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
CCNT1-202ENST00000417344 Q96MF0 132 aa4.49□□□□□ -1.69
CCNT1-202ENST00000417344 ZFHX3Q15911 3703 aa4.49□□□□□ -1.69
CCNT1-202ENST00000417344 TRBV6-4A0A1B0GX49 114 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 IGHV3-11P01762 117 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 HTN1P15515 57 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 NREPQ16612 68 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 Q6ZQT0 140 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 Q8NA96 180 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 SVEP1Q4LDE5 3571 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 ABCA4P78363 2273 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
CCNT1-202ENST00000417344 K7EQG2 157 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 ERC2-IT1O76042 136 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 LPAL2Q16609 132 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 DYNLRB2Q8TF09 96 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 C11orf68Q9H3H3 251 aaKnown RBP4.48□□□□□ -1.69
CCNT1-202ENST00000417344 FAM30AQ9NZY2 134 aa4.48□□□□□ -1.69
CCNT1-202ENST00000417344 TACC2O95359 2948 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 A0A087WZ39 114 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 LY6HO94772 140 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
CCNT1-202ENST00000417344 USMG5Q96IX5 58 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 TOMM7Q9P0U1 55 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 POLEQ07864 2286 aa4.47□□□□□ -1.69
CCNT1-202ENST00000417344 ROS1P08922 2347 aa4.46□□□□□ -1.69
CCNT1-202ENST00000417344 K7EQD1 137 aa4.46□□□□□ -1.69
CCNT1-202ENST00000417344 PRYO14603 147 aa4.46□□□□□ -1.69
CCNT1-202ENST00000417344 Q6ZTC4 211 aa4.46□□□□□ -1.69
CCNT1-202ENST00000417344 CDC42SE2Q9NRR3 84 aa4.46□□□□□ -1.69
CCNT1-202ENST00000417344 CUL9Q8IWT3 2517 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 CEP250Q9BV73 2442 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 A0A096LNT2 108 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 K7EMT4 169 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 M0R2N4 97 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 DAD1P61803 113 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 DEFB109BQ30KR1 87 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 PKDREJQ9NTG1 2253 aa4.46□□□□□ -1.7
CCNT1-202ENST00000417344 TRBV10-1A0A0K0K1A3 114 aa4.45□□□□□ -1.7
CCNT1-202ENST00000417344 H3BUA1 57 aa4.45□□□□□ -1.7
CCNT1-202ENST00000417344 BPY2O14599 106 aa4.45□□□□□ -1.7
CCNT1-202ENST00000417344 ZFP36P26651 326 aaKnown RBP4.45□□□□□ -1.7
CCNT1-202ENST00000417344 Q1T7F1 81 aa4.45□□□□□ -1.7
CCNT1-202ENST00000417344 NTM-AS1Q6ZSK4 140 aa4.45□□□□□ -1.7
CCNT1-202ENST00000417344 BBC3Q96PG8 261 aaPredicted RBP4.45□□□□□ -1.7
CCNT1-202ENST00000417344 TMEM89A2RUT3 159 aa4.44□□□□□ -1.7
CCNT1-202ENST00000417344 PRM2P04554 102 aa4.44□□□□□ -1.7
CCNT1-202ENST00000417344 NANOS2P60321 138 aaKnown RBP4.44□□□□□ -1.7
CCNT1-202ENST00000417344 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
CCNT1-202ENST00000417344 C6orf223Q8N319 242 aa4.44□□□□□ -1.7
CCNT1-202ENST00000417344 ZNF843Q8N446 348 aa4.44□□□□□ -1.7
CCNT1-202ENST00000417344 RELNP78509 3460 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 ADGRG4Q8IZF6 3080 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 BOD1L1Q8NFC6 3051 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 PDE6GP18545 87 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 GNLYP22749 145 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 LINC01560Q8TB33 94 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 IGFL3Q6UXB1 125 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 Q6ZRP5 223 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 SCXQ7RTU7 201 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
CCNT1-202ENST00000417344 C11orf44Q8N8P7 122 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 WWC2-AS2Q96NR7 200 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 ARRDC1-AS1Q9H2J1 176 aa4.43□□□□□ -1.7
CCNT1-202ENST00000417344 TPRP12270 2363 aaKnown RBP4.42□□□□□ -1.7
CCNT1-202ENST00000417344 UBE2L6O14933 153 aa4.42□□□□□ -1.7
CCNT1-202ENST00000417344 C9orf66Q5T8R8 295 aa4.42□□□□□ -1.7
CCNT1-202ENST00000417344 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
CCNT1-202ENST00000417344 PTPRQQ9UMZ3 2332 aa4.41□□□□□ -1.7
CCNT1-202ENST00000417344 LINC00575Q6W349 94 aa4.41□□□□□ -1.7
CCNT1-202ENST00000417344 HIGD2AQ9BW72 106 aa4.41□□□□□ -1.7
CCNT1-202ENST00000417344 LAMA5O15230 3695 aa4.41□□□□□ -1.7
CCNT1-202ENST00000417344 IGHV3OR16-9A0A0B4J2B5 98 aa4.4□□□□□ -1.7
CCNT1-202ENST00000417344 LRCOL1A6NCL2 159 aa4.4□□□□□ -1.7
CCNT1-202ENST00000417344 PSPHP1O15172 72 aa4.4□□□□□ -1.7
CCNT1-202ENST00000417344 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.7
CCNT1-202ENST00000417344 C6orf99Q4VX62 202 aa4.4□□□□□ -1.7
CCNT1-202ENST00000417344 TRIOBPQ9H2D6 2365 aa4.4□□□□□ -1.7
CCNT1-202ENST00000417344 CEP290O15078 2479 aa4.4□□□□□ -1.71
CCNT1-202ENST00000417344 RP1L1Q8IWN7 2480 aaPredicted RBP4.4□□□□□ -1.71
CCNT1-202ENST00000417344 IGKV3OR2-268A0A0C4DH90 116 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms