RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
ITGB1-204ENST00000417122 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
ITGB1-204ENST00000417122 Q6ZRU5 148 aa9.86□□□□□ -0.83
ITGB1-204ENST00000417122 Q8N8P6 123 aa9.86□□□□□ -0.83
ITGB1-204ENST00000417122 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
ITGB1-204ENST00000417122 CTDSP1Q9GZU7 261 aa9.86□□□□□ -0.83
ITGB1-204ENST00000417122 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-204ENST00000417122 OXTP01178 125 aa9.85□□□□□ -0.83
ITGB1-204ENST00000417122 C7orf33Q8WU49 177 aa9.85□□□□□ -0.83
ITGB1-204ENST00000417122 C2orf48Q96LS8 159 aa9.85□□□□□ -0.83
ITGB1-204ENST00000417122 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
ITGB1-204ENST00000417122 IGLV4-3A0A075B6K6 122 aa9.84□□□□□ -0.83
ITGB1-204ENST00000417122 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
ITGB1-204ENST00000417122 SPAG11BQ08648 103 aa9.84□□□□□ -0.83
ITGB1-204ENST00000417122 OR10D4PQ8NGN7 298 aa9.84□□□□□ -0.83
ITGB1-204ENST00000417122 SEC11CQ9BY50 192 aa9.84□□□□□ -0.83
ITGB1-204ENST00000417122 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
ITGB1-204ENST00000417122 COMMD7Q86VX2 200 aa9.83□□□□□ -0.84
ITGB1-204ENST00000417122 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
ITGB1-204ENST00000417122 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
ITGB1-204ENST00000417122 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 K7EMI3 77 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 ORMDL2Q53FV1 153 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 C2orf66Q6UXQ4 117 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 ORAOV1Q8WV07 137 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 LRP1Q07954 4544 aaKnown RBP9.82□□□□□ -0.84
ITGB1-204ENST00000417122 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
ITGB1-204ENST00000417122 TGIF2-C20orf24A0A0A6YYL0 155 aa9.81□□□□□ -0.84
ITGB1-204ENST00000417122 TEX43Q6ZNM6 134 aa9.81□□□□□ -0.84
ITGB1-204ENST00000417122 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
ITGB1-204ENST00000417122 S100PP25815 95 aa9.8□□□□□ -0.84
ITGB1-204ENST00000417122 KIAA1644Q3SXP7 199 aa9.8□□□□□ -0.84
ITGB1-204ENST00000417122 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
ITGB1-204ENST00000417122 F8WDY8 70 aa9.79□□□□□ -0.84
ITGB1-204ENST00000417122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
ITGB1-204ENST00000417122 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
ITGB1-204ENST00000417122 Q6ZN92 141 aa9.79□□□□□ -0.84
ITGB1-204ENST00000417122 C2orf88Q9BSF0 95 aa9.79□□□□□ -0.84
ITGB1-204ENST00000417122 A0A087WZ39 114 aa9.78□□□□□ -0.84
ITGB1-204ENST00000417122 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
ITGB1-204ENST00000417122 UBE2D1P51668 147 aa9.78□□□□□ -0.84
ITGB1-204ENST00000417122 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
ITGB1-204ENST00000417122 AMELXQ99217 191 aa9.78□□□□□ -0.84
ITGB1-204ENST00000417122 VCX2Q9H322 139 aa9.78□□□□□ -0.84
ITGB1-204ENST00000417122 MRPL35Q9NZE8 188 aaKnown RBP9.78□□□□□ -0.84
ITGB1-204ENST00000417122 NDUFA1O15239 70 aa9.77□□□□□ -0.85
ITGB1-204ENST00000417122 NPSP0C0P6 89 aa9.77□□□□□ -0.85
ITGB1-204ENST00000417122 PRR3P79522 188 aaKnown RBP9.77□□□□□ -0.85
ITGB1-204ENST00000417122 C10orf91Q5T1B1 145 aa9.77□□□□□ -0.85
ITGB1-204ENST00000417122 ZC2HC1BQ5TFG8 222 aa9.77□□□□□ -0.85
ITGB1-204ENST00000417122 LINC00173Q6ZV60 143 aa9.77□□□□□ -0.85
ITGB1-204ENST00000417122 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
ITGB1-204ENST00000417122 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
ITGB1-204ENST00000417122 G0S2P27469 103 aa9.76□□□□□ -0.85
ITGB1-204ENST00000417122 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
ITGB1-204ENST00000417122 C10orf25Q5T742 122 aa9.75□□□□□ -0.85
ITGB1-204ENST00000417122 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
ITGB1-204ENST00000417122 RPS10P5Q9NQ39 176 aa9.75□□□□□ -0.85
ITGB1-204ENST00000417122 CARHSP1Q9Y2V2 147 aaKnown RBP9.75□□□□□ -0.85
ITGB1-204ENST00000417122 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
ITGB1-204ENST00000417122 RHEBQ15382 184 aa9.74□□□□□ -0.85
ITGB1-204ENST00000417122 COX19Q49B96 90 aa9.74□□□□□ -0.85
ITGB1-204ENST00000417122 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
ITGB1-204ENST00000417122 PAPPA-AS1Q5QFB9 102 aa9.74□□□□□ -0.85
ITGB1-204ENST00000417122 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
ITGB1-204ENST00000417122 TOMM6Q96B49 74 aa9.74□□□□□ -0.85
ITGB1-204ENST00000417122 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
ITGB1-204ENST00000417122 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
ITGB1-204ENST00000417122 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-204ENST00000417122 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
ITGB1-204ENST00000417122 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
ITGB1-204ENST00000417122 Q6ZRP5 223 aa9.72□□□□□ -0.85
ITGB1-204ENST00000417122 MT-ND6P03923 174 aa9.71□□□□□ -0.86
ITGB1-204ENST00000417122 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.86
ITGB1-204ENST00000417122 TRBV30A0A0K0K1B3 111 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 HERVK_113P63121 156 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 SEC11AP67812 179 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 FABP9Q0Z7S8 132 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 ERASQ7Z444 233 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
ITGB1-204ENST00000417122 C2orf82Q6UX34 121 aa9.69□□□□□ -0.86
ITGB1-204ENST00000417122 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
ITGB1-204ENST00000417122 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 PRSS2P07478 247 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 PHF5AQ7RTV0 110 aaKnown RBP9.68□□□□□ -0.86
ITGB1-204ENST00000417122 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
ITGB1-204ENST00000417122 TOMM7Q9P0U1 55 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
ITGB1-204ENST00000417122 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
ITGB1-204ENST00000417122 FA2HQ7L5A8 372 aa9.67□□□□□ -0.86
ITGB1-204ENST00000417122 SMCO4Q9NRQ5 59 aa9.67□□□□□ -0.86
ITGB1-204ENST00000417122 FAM168BA1KXE4 195 aa9.66□□□□□ -0.86
ITGB1-204ENST00000417122 APOC3P02656 99 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms