RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 SND1-IT1Q9HBX3 110 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 TRAV8-1A0A0A6YYK1 113 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 IGHV7-4-1A0A0J9YVY3 117 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 M0R143 59 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 G0S2P27469 103 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 CMC4P56277 68 aaPredicted RBP3.92□□□□□ -1.78
EPHA4-204ENST00000415749 MP68P56378 58 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 HBBP68871 147 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 PDE6HQ13956 83 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 EBLN2Q6P2I7 272 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 SCGB1D4Q6XE38 83 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 BPIFA4PQ86YQ2 179 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 FAM19A2Q8N3H0 131 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 ZNRF2Q8NHG8 242 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
EPHA4-204ENST00000415749 ZC2HC1AQ96GY0 325 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 ZFP30Q9Y2G7 519 aa3.92□□□□□ -1.78
EPHA4-204ENST00000415749 DNAH5Q8TE73 4624 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 OR4C46A6NHA9 309 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 CTSGP08311 255 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 KRTDAPP60985 99 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 C12orf74Q32Q52 190 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 UNQ9165/PRO28630Q6UXU0 137 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 GOLT1AQ6ZVE7 132 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 ORMDL3Q8N138 153 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 Q8NAQ8 132 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 VAMP8Q9BV40 100 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 UFC1Q9Y3C8 167 aa3.91□□□□□ -1.78
EPHA4-204ENST00000415749 FAT1Q14517 4588 aa3.9□□□□□ -1.78
EPHA4-204ENST00000415749 IGHV3-49A0A0A0MS15 119 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 C20orf202A1L168 122 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 IL4P05112 153 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 ATP5G1P05496 136 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 MIFP14174 115 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 SPATA45Q537H7 98 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 C21orf62Q9NYP8 219 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 S4R3C0 116 aa3.9□□□□□ -1.79
EPHA4-204ENST00000415749 IGHV1-24A0A0C4DH33 117 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 A0A1B0GUT8 65 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 TMEM223A0PJW6 202 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 LINC01546A6NGU7 62 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 SMIM9A6NGZ8 99 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 M0R2Z0 102 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 M0R3E3 92 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 GNG7O60262 68 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 ZNF861PO60384 105 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 IGLC6P0CF74 106 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 NTF3P20783 257 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 PSG9Q00887 426 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 Q6AWC8 147 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 ZNF705AQ6ZN79 300 aaPredicted RBP3.89□□□□□ -1.79
EPHA4-204ENST00000415749 OR2D3Q8NGH3 330 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 CIRBP-AS1Q8TBR5 109 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 UQCR10Q9UDW1 63 aa3.89□□□□□ -1.79
EPHA4-204ENST00000415749 MRPS16Q9Y3D3 137 aaKnown RBP3.89□□□□□ -1.79
EPHA4-204ENST00000415749 A0A096LNJ9 63 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 TRBV7-1A0A0A6YYK4 115 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 SYS1-DBNDD2H3BUS1 97 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 SH2D1AO60880 128 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 RPL7P18124 248 aaKnown RBP3.88□□□□□ -1.79
EPHA4-204ENST00000415749 ZNF80P51504 273 aaPredicted RBP3.88□□□□□ -1.79
EPHA4-204ENST00000415749 DAD1P61803 113 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 Q5VSD8 79 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 BORCS7Q96B45 105 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 TMEM70Q9BUB7 260 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 CNFNQ9BYD5 112 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 CELA1Q9UNI1 258 aa3.88□□□□□ -1.79
EPHA4-204ENST00000415749 MYCBP2O75592 4640 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 IGKV3-7A0A075B6H7 116 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 IGKV2-40A0A087WW87 121 aaPredicted RBP3.87□□□□□ -1.79
EPHA4-204ENST00000415749 RBAKDNA6NC62 111 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 OR2T8A6NH00 312 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 DLEU1O43261 78 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 IGKV2D-40P01614 121 aaPredicted RBP3.87□□□□□ -1.79
EPHA4-204ENST00000415749 Q56UQ5 140 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 LINC01545Q5VT33 79 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 FAM104BQ5XKR9 115 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 MORN3Q6PF18 240 aaPredicted RBP3.87□□□□□ -1.79
EPHA4-204ENST00000415749 LYZL1Q6UWQ5 148 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 CHCHD7Q9BUK0 85 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 DAZ1Q9NQZ3 744 aaKnown RBP3.87□□□□□ -1.79
EPHA4-204ENST00000415749 PRR34Q9NV39 138 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 RABAC1Q9UI14 185 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 LAMTOR2Q9Y2Q5 125 aa3.87□□□□□ -1.79
EPHA4-204ENST00000415749 NACAE9PAV3 2078 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 TMEM189A5PLL7 270 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 TMEM238C9JI98 176 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 ZNF207O43670 478 aaKnown RBP3.86□□□□□ -1.79
EPHA4-204ENST00000415749 LEPROTL1O95214 131 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 CSN1S1P47710 185 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 RPS20P60866 119 aaKnown RBP3.86□□□□□ -1.79
EPHA4-204ENST00000415749 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
EPHA4-204ENST00000415749 ATOH7Q8N100 152 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms