RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
LIMS4-201ENST00000413601 IFITM10A6NMD0 228 aa9.41□□□□□ -0.9
LIMS4-201ENST00000413601 SYCNQ0VAF6 134 aa9.41□□□□□ -0.9
LIMS4-201ENST00000413601 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
LIMS4-201ENST00000413601 RPL37AP61513 92 aaKnown RBP9.4□□□□□ -0.9
LIMS4-201ENST00000413601 MAJINQ3KP22 176 aa9.4□□□□□ -0.9
LIMS4-201ENST00000413601 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
LIMS4-201ENST00000413601 C2orf66Q6UXQ4 117 aa9.4□□□□□ -0.9
LIMS4-201ENST00000413601 NXT2Q9NPJ8 142 aaKnown RBP9.4□□□□□ -0.9
LIMS4-201ENST00000413601 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
LIMS4-201ENST00000413601 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
LIMS4-201ENST00000413601 A0A096LNI7 61 aa9.39□□□□□ -0.91
LIMS4-201ENST00000413601 IGHV3OR16-9A0A0B4J2B5 98 aa9.39□□□□□ -0.91
LIMS4-201ENST00000413601 APOMO95445 188 aa9.39□□□□□ -0.91
LIMS4-201ENST00000413601 RHEBQ15382 184 aa9.39□□□□□ -0.91
LIMS4-201ENST00000413601 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
LIMS4-201ENST00000413601 GNB1LQ9BYB4 327 aa9.39□□□□□ -0.91
LIMS4-201ENST00000413601 K7EMI3 77 aa9.38□□□□□ -0.91
LIMS4-201ENST00000413601 Q6ZRU5 148 aa9.38□□□□□ -0.91
LIMS4-201ENST00000413601 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
LIMS4-201ENST00000413601 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
LIMS4-201ENST00000413601 ZC2HC1BQ5TFG8 222 aa9.37□□□□□ -0.91
LIMS4-201ENST00000413601 CAMK2N2Q96S95 79 aa9.37□□□□□ -0.91
LIMS4-201ENST00000413601 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
LIMS4-201ENST00000413601 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
LIMS4-201ENST00000413601 STPG4Q8N801 248 aa9.36□□□□□ -0.91
LIMS4-201ENST00000413601 ORAOV1Q8WV07 137 aa9.36□□□□□ -0.91
LIMS4-201ENST00000413601 C2orf48Q96LS8 159 aa9.36□□□□□ -0.91
LIMS4-201ENST00000413601 TGIF2-C20orf24A0A0A6YYL0 155 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 J3QL48 77 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 COX19Q49B96 90 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 Q6ZN92 141 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 ALKBH7Q9BT30 221 aaPredicted RBP9.35□□□□□ -0.91
LIMS4-201ENST00000413601 PKIGQ9Y2B9 76 aa9.35□□□□□ -0.91
LIMS4-201ENST00000413601 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 APOC3P02656 99 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 UBE2D1P51668 147 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 HNRNPA3P51991 378 aaKnown RBP9.34□□□□□ -0.91
LIMS4-201ENST00000413601 FABP9Q0Z7S8 132 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 AMELXQ99217 191 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
LIMS4-201ENST00000413601 VCX2Q9H322 139 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
LIMS4-201ENST00000413601 A0A087WZ39 114 aa9.33□□□□□ -0.92
LIMS4-201ENST00000413601 MT-ND6P03923 174 aa9.33□□□□□ -0.92
LIMS4-201ENST00000413601 G0S2P27469 103 aa9.33□□□□□ -0.92
LIMS4-201ENST00000413601 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
LIMS4-201ENST00000413601 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
LIMS4-201ENST00000413601 A0A0J9YXV3 536 aa9.32□□□□□ -0.92
LIMS4-201ENST00000413601 NPSP0C0P6 89 aa9.32□□□□□ -0.92
LIMS4-201ENST00000413601 PTTG1IPP53801 180 aa9.32□□□□□ -0.92
LIMS4-201ENST00000413601 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
LIMS4-201ENST00000413601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
LIMS4-201ENST00000413601 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
LIMS4-201ENST00000413601 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
LIMS4-201ENST00000413601 F8WDY8 70 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 NDUFA1O15239 70 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 SNAPINO95295 136 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 NDUFA5Q16718 116 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 SVBPQ8N300 66 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 SCGB3A1Q96QR1 104 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 TIMM17AQ99595 171 aa9.3□□□□□ -0.92
LIMS4-201ENST00000413601 DMBT1Q9UGM3 2413 aaPredicted RBP9.29□□□□□ -0.92
LIMS4-201ENST00000413601 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
LIMS4-201ENST00000413601 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
LIMS4-201ENST00000413601 PAPPA-AS1Q5QFB9 102 aa9.29□□□□□ -0.92
LIMS4-201ENST00000413601 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
LIMS4-201ENST00000413601 ERASQ7Z444 233 aa9.29□□□□□ -0.92
LIMS4-201ENST00000413601 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
LIMS4-201ENST00000413601 TRAPPC1Q9Y5R8 145 aa9.29□□□□□ -0.92
LIMS4-201ENST00000413601 LOC100996750A0A140TA64 210 aa9.28□□□□□ -0.92
LIMS4-201ENST00000413601 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
LIMS4-201ENST00000413601 FA2HQ7L5A8 372 aa9.28□□□□□ -0.92
LIMS4-201ENST00000413601 FAM19A3Q7Z5A8 133 aa9.28□□□□□ -0.92
LIMS4-201ENST00000413601 KRTAP4-6Q9BYQ5 205 aa9.28□□□□□ -0.92
LIMS4-201ENST00000413601 LINC01561Q8N1V8 128 aa9.27□□□□□ -0.93
LIMS4-201ENST00000413601 SMCO4Q9NRQ5 59 aa9.27□□□□□ -0.93
LIMS4-201ENST00000413601 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
LIMS4-201ENST00000413601 A0A1W2PNN7 141 aa9.26□□□□□ -0.93
LIMS4-201ENST00000413601 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
LIMS4-201ENST00000413601 OXTP01178 125 aa9.25□□□□□ -0.93
LIMS4-201ENST00000413601 HERVK_113P63121 156 aa9.25□□□□□ -0.93
LIMS4-201ENST00000413601 SEC11AP67812 179 aa9.25□□□□□ -0.93
LIMS4-201ENST00000413601 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
LIMS4-201ENST00000413601 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
LIMS4-201ENST00000413601 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
LIMS4-201ENST00000413601 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
LIMS4-201ENST00000413601 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
LIMS4-201ENST00000413601 Q6ZRP5 223 aa9.24□□□□□ -0.93
LIMS4-201ENST00000413601 C18orf32Q8TCD1 76 aa9.24□□□□□ -0.93
LIMS4-201ENST00000413601 TOMM7Q9P0U1 55 aa9.24□□□□□ -0.93
LIMS4-201ENST00000413601 PRSS2P07478 247 aa9.23□□□□□ -0.93
LIMS4-201ENST00000413601 TLX1NBP0CAT3 122 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms