RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 IFITM10A6NMD0 228 aa11.97□□□□□ -0.49
SF3A1-202ENST00000411423 RAB5AP20339 215 aa11.97□□□□□ -0.49
SF3A1-202ENST00000411423 ZC2HC1BQ5TFG8 222 aa11.97□□□□□ -0.49
SF3A1-202ENST00000411423 Q8N8P6 123 aa11.97□□□□□ -0.49
SF3A1-202ENST00000411423 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
SF3A1-202ENST00000411423 KIAA1644Q3SXP7 199 aa11.96□□□□□ -0.49
SF3A1-202ENST00000411423 COMMD7Q86VX2 200 aa11.96□□□□□ -0.49
SF3A1-202ENST00000411423 PYGO1Q9Y3Y4 419 aa11.96□□□□□ -0.49
SF3A1-202ENST00000411423 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
SF3A1-202ENST00000411423 IFI27P40305 119 aaPredicted RBP11.94□□□□□ -0.5
SF3A1-202ENST00000411423 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
SF3A1-202ENST00000411423 LINC00173Q6ZV60 143 aa11.94□□□□□ -0.5
SF3A1-202ENST00000411423 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
SF3A1-202ENST00000411423 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
SF3A1-202ENST00000411423 A0A0J9YXV3 536 aa11.93□□□□□ -0.5
SF3A1-202ENST00000411423 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
SF3A1-202ENST00000411423 C10orf91Q5T1B1 145 aa11.93□□□□□ -0.5
SF3A1-202ENST00000411423 LINC00242Q5T6M2 205 aa11.93□□□□□ -0.5
SF3A1-202ENST00000411423 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
SF3A1-202ENST00000411423 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
SF3A1-202ENST00000411423 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
SF3A1-202ENST00000411423 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
SF3A1-202ENST00000411423 TMEM141Q96I45 108 aa11.92□□□□□ -0.5
SF3A1-202ENST00000411423 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
SF3A1-202ENST00000411423 APOMO95445 188 aa11.91□□□□□ -0.5
SF3A1-202ENST00000411423 OXTP01178 125 aa11.91□□□□□ -0.5
SF3A1-202ENST00000411423 GAGE2BQ13066 116 aa11.91□□□□□ -0.5
SF3A1-202ENST00000411423 C10orf25Q5T742 122 aa11.91□□□□□ -0.5
SF3A1-202ENST00000411423 OR10D4PQ8NGN7 298 aa11.91□□□□□ -0.5
SF3A1-202ENST00000411423 LOC107984640A0A0U1RRK4 108 aa11.9□□□□□ -0.5
SF3A1-202ENST00000411423 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
SF3A1-202ENST00000411423 IGIPA6NJ69 53 aa11.9□□□□□ -0.5
SF3A1-202ENST00000411423 UBE2D1P51668 147 aa11.9□□□□□ -0.5
SF3A1-202ENST00000411423 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
SF3A1-202ENST00000411423 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
SF3A1-202ENST00000411423 AMELXQ99217 191 aa11.89□□□□□ -0.51
SF3A1-202ENST00000411423 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
SF3A1-202ENST00000411423 CARHSP1Q9Y2V2 147 aaKnown RBP11.89□□□□□ -0.51
SF3A1-202ENST00000411423 PRR3P79522 188 aaKnown RBP11.88□□□□□ -0.51
SF3A1-202ENST00000411423 KIAA0087Q14695 138 aa11.88□□□□□ -0.51
SF3A1-202ENST00000411423 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
SF3A1-202ENST00000411423 C7orf33Q8WU49 177 aa11.88□□□□□ -0.51
SF3A1-202ENST00000411423 A0A087WZ39 114 aa11.87□□□□□ -0.51
SF3A1-202ENST00000411423 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
SF3A1-202ENST00000411423 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
SF3A1-202ENST00000411423 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
SF3A1-202ENST00000411423 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
SF3A1-202ENST00000411423 RNF151Q2KHN1 245 aa11.86□□□□□ -0.51
SF3A1-202ENST00000411423 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
SF3A1-202ENST00000411423 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
SF3A1-202ENST00000411423 PKIGQ9Y2B9 76 aa11.86□□□□□ -0.51
SF3A1-202ENST00000411423 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
SF3A1-202ENST00000411423 K7EMI3 77 aa11.85□□□□□ -0.51
SF3A1-202ENST00000411423 RPL18AQ02543 176 aaKnown RBP11.85□□□□□ -0.51
SF3A1-202ENST00000411423 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-202ENST00000411423 GNB1LQ9BYB4 327 aa11.85□□□□□ -0.51
SF3A1-202ENST00000411423 TNXBP22105 4242 aa11.84□□□□□ -0.51
SF3A1-202ENST00000411423 TOMM6Q96B49 74 aa11.84□□□□□ -0.51
SF3A1-202ENST00000411423 S100PP25815 95 aa11.83□□□□□ -0.52
SF3A1-202ENST00000411423 C9orf116Q5BN46 136 aaPredicted RBP11.83□□□□□ -0.52
SF3A1-202ENST00000411423 VCX2Q9H322 139 aa11.83□□□□□ -0.52
SF3A1-202ENST00000411423 RPS10P5Q9NQ39 176 aa11.83□□□□□ -0.52
SF3A1-202ENST00000411423 NDUFA1O15239 70 aa11.82□□□□□ -0.52
SF3A1-202ENST00000411423 C2orf82Q6UX34 121 aa11.82□□□□□ -0.52
SF3A1-202ENST00000411423 Q6ZRP5 223 aa11.82□□□□□ -0.52
SF3A1-202ENST00000411423 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
SF3A1-202ENST00000411423 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
SF3A1-202ENST00000411423 LINC01546A6NGU7 62 aa11.81□□□□□ -0.52
SF3A1-202ENST00000411423 F8WDY8 70 aa11.81□□□□□ -0.52
SF3A1-202ENST00000411423 NPSP0C0P6 89 aa11.81□□□□□ -0.52
SF3A1-202ENST00000411423 RHEBQ15382 184 aa11.81□□□□□ -0.52
SF3A1-202ENST00000411423 Q6ZN92 141 aa11.81□□□□□ -0.52
SF3A1-202ENST00000411423 FAM168BA1KXE4 195 aa11.8□□□□□ -0.52
SF3A1-202ENST00000411423 TIMM17AQ99595 171 aa11.8□□□□□ -0.52
SF3A1-202ENST00000411423 MRPL18Q9H0U6 180 aaKnown RBP11.8□□□□□ -0.52
SF3A1-202ENST00000411423 TLX1NBP0CAT3 122 aa11.79□□□□□ -0.52
SF3A1-202ENST00000411423 PHF5AQ7RTV0 110 aaKnown RBP11.79□□□□□ -0.52
SF3A1-202ENST00000411423 KRTAP7-1Q8IUC3 87 aa11.79□□□□□ -0.52
SF3A1-202ENST00000411423 LINC01561Q8N1V8 128 aa11.79□□□□□ -0.52
SF3A1-202ENST00000411423 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
SF3A1-202ENST00000411423 CDKN2A-AS1Q9UH64 79 aa11.77□□□□□ -0.53
SF3A1-202ENST00000411423 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
SF3A1-202ENST00000411423 ERASQ7Z444 233 aa11.76□□□□□ -0.53
SF3A1-202ENST00000411423 KRTAP11-1Q8IUC1 163 aa11.76□□□□□ -0.53
SF3A1-202ENST00000411423 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
SF3A1-202ENST00000411423 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
SF3A1-202ENST00000411423 COX19Q49B96 90 aa11.75□□□□□ -0.53
SF3A1-202ENST00000411423 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
SF3A1-202ENST00000411423 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
SF3A1-202ENST00000411423 APOC3P02656 99 aa11.74□□□□□ -0.53
SF3A1-202ENST00000411423 MT-ND6P03923 174 aa11.74□□□□□ -0.53
SF3A1-202ENST00000411423 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
SF3A1-202ENST00000411423 PSORS1C2Q9UIG4 136 aa11.74□□□□□ -0.53
SF3A1-202ENST00000411423 A0A096LNJ9 63 aa11.73□□□□□ -0.53
SF3A1-202ENST00000411423 TRBV30A0A0K0K1B3 111 aa11.73□□□□□ -0.53
SF3A1-202ENST00000411423 G0S2P27469 103 aa11.73□□□□□ -0.53
SF3A1-202ENST00000411423 SVBPQ8N300 66 aa11.73□□□□□ -0.53
SF3A1-202ENST00000411423 HERVK_113P63121 156 aa11.72□□□□□ -0.53
SF3A1-202ENST00000411423 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
SF3A1-202ENST00000411423 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms