RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 J3QQQ9 107 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 ZNF688P0C7X2 276 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 LINC00596Q86U02 117 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 M0R1B8 84 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 HIST1H4AP62805 103 aaKnown RBP2.16□□□□□ -2.06
RGPD3-202ENST00000409886 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 TMEM61Q8N0U2 210 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 IGHV1OR15-1A0A075B7D0 117 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 A0A1W2PNN7 141 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 M0QY20 66 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 M0R2P5 195 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 ATP6V0E1O15342 81 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 TIRAPP58753 221 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 ERVK-16P61578 105 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 GAGE2BQ13066 116 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 GAGE2EQ4V326 116 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 LINC00311Q8N616 119 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 FMC1Q96HJ9 113 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 TMEM126AQ9H061 195 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 GAGE2DQ9UEU5 116 aa2.16□□□□□ -2.06
RGPD3-202ENST00000409886 SDHAF1A6NFY7 115 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 NPFFO15130 113 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 DAZ2Q13117 558 aaKnown RBP2.15□□□□□ -2.06
RGPD3-202ENST00000409886 LINC01559Q495D7 138 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 DAZ4Q86SG3 579 aaKnown RBP2.15□□□□□ -2.06
RGPD3-202ENST00000409886 LINC00526Q96FQ7 95 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 TIMM21Q9BVV7 248 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 KRTAP4-5Q9BYR2 181 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 DAZ1Q9NQZ3 744 aaKnown RBP2.15□□□□□ -2.06
RGPD3-202ENST00000409886 DAZ3Q9NR90 486 aaKnown RBP2.15□□□□□ -2.06
RGPD3-202ENST00000409886 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 SMIM9A6NGZ8 99 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 DEFB112Q30KQ8 113 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 FAM74A4Q5TZK3 123 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 C5orf38Q86SI9 138 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 Q8N9L7 120 aa2.15□□□□□ -2.06
RGPD3-202ENST00000409886 A0A087WYN8 130 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 TMEM262E9PQX1 116 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 ZNF56Q15929 161 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 Q8N6K4 173 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 DPH3Q96FX2 82 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 SIRPDQ9H106 197 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 DYNLRB1Q9NP97 96 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 TMEM14CQ9P0S9 112 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 A8MWV9 139 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 RPL11P62913 178 aaKnown RBP2.15□□□□□ -2.07
RGPD3-202ENST00000409886 FAM162BQ5T6X4 162 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 SCGB1D4Q6XE38 83 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 TOMM6Q96B49 74 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 WFDC10AQ9H1F0 79 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 U3KQE9 123 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 IGHV4-4A0A075B6R2 117 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 IGHV4OR15-8A0A075B7B6 117 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 A0A087WW49 117 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 IGHV3-16A0A0C4DH30 117 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 C9orf66Q5T8R8 295 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 SUMO4Q6EEV6 95 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 PYGO1Q9Y3Y4 419 aa2.15□□□□□ -2.07
RGPD3-202ENST00000409886 RNF213Q63HN8 5207 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.14□□□□□ -2.07
RGPD3-202ENST00000409886 TRBV27A0A0K0K1C4 114 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 IGKV2-29A2NJV5 120 aaPredicted RBP2.14□□□□□ -2.07
RGPD3-202ENST00000409886 RPL35AP18077 110 aaKnown RBP2.14□□□□□ -2.07
RGPD3-202ENST00000409886 COX19Q49B96 90 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 HIGD1AQ9Y241 93 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 FAM223BA6NKX1 122 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 ZFAND6Q6FIF0 208 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 CLEC19AQ6UXS0 136 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 SCGB3A1Q96QR1 104 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 LOC100131303A0A0U1RQF7 123 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 LST1O00453 97 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 SCGB1A1P11684 91 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 ERHP84090 104 aaKnown RBP2.14□□□□□ -2.07
RGPD3-202ENST00000409886 DPH3P1Q9H4G8 78 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 LRP2P98164 4655 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 LAGE3Q14657 143 aa2.14□□□□□ -2.07
RGPD3-202ENST00000409886 H7BZZ5 65 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 K7EQG2 157 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 INAFM2P0DMQ5 153 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 HTN1P15515 57 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 RPL13AP40429 203 aaKnown RBP2.13□□□□□ -2.07
RGPD3-202ENST00000409886 PMVKQ15126 192 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 SPINK13Q1W4C9 94 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 TRAV10A0A0B4J240 114 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 TRAV25A0A0B4J276 109 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 KRTAP29-1A8MX34 341 aaPredicted RBP2.13□□□□□ -2.07
RGPD3-202ENST00000409886 DEFB136Q30KP8 78 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 C9orf116Q5BN46 136 aaPredicted RBP2.13□□□□□ -2.07
RGPD3-202ENST00000409886 TRBV7-7A0A0K0K1E9 115 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 PKIGQ9Y2B9 76 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 LRCOL1A6NCL2 159 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 ODF3BA8MYP8 253 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 IFITM1P13164 125 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 MAP1LC3AQ9H492 121 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 C14orf132Q9NPU4 83 aa2.13□□□□□ -2.07
RGPD3-202ENST00000409886 UBE2D4Q9Y2X8 147 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms