RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 UBE2D3P61077 147 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 UBE2D2P62837 147 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 LINC01620Q4KN68 170 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 Q8N8P6 123 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 Q8N9L7 120 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 PRADC1Q9BSG0 188 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 MAP1LC3AQ9H492 121 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 ST20Q9HBF5 79 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 PRO0255Q9UI72 69 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 CSMD3Q7Z407 3707 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 TRAV26-1A0A087WT03 109 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 A0A096LNJ9 63 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 DEFB131BA0A096LNP1 70 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 TRAV10A0A0B4J240 114 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 LOC389332A0A1B0GUA5 103 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 F5H768 121 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 I3L3M4 83 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 K7EMI3 77 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 LINC00614P0C842 121 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 IFI27P40305 119 aaPredicted RBP2.68□□□□□ -1.98
CLK1-203ENST00000409769 NDUFA6P56556 154 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 NEGR1Q7Z3B1 354 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 DAZ4Q86SG3 579 aaKnown RBP2.68□□□□□ -1.98
CLK1-203ENST00000409769 NIT1Q86X76 327 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 ZNRF2Q8NHG8 242 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
CLK1-203ENST00000409769 CHCHD7Q9BUK0 85 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
CLK1-203ENST00000409769 NXT2Q9NPJ8 142 aaKnown RBP2.68□□□□□ -1.98
CLK1-203ENST00000409769 DAZ3Q9NR90 486 aaKnown RBP2.68□□□□□ -1.98
CLK1-203ENST00000409769 A0A096LPF7 62 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 IGHV1-24A0A0C4DH33 117 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 A0A0J9YY99 117 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 A0A1B0GWB2 263 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 TCAPO15273 167 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 PMCHP20382 165 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 LAGE3Q14657 143 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 MRPL23Q16540 153 aaKnown RBP2.67□□□□□ -1.98
CLK1-203ENST00000409769 NTM-AS1Q6ZSK4 140 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 BAGE3Q86Y29 109 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 HIST3H2BBQ8N257 126 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 FAM104AQ969W3 186 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 TMEM101Q96IK0 257 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 PACRGQ96M98 296 aaPredicted RBP2.67□□□□□ -1.98
CLK1-203ENST00000409769 GTSF1LQ9H1H1 148 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 ICOSQ9Y6W8 199 aa2.67□□□□□ -1.98
CLK1-203ENST00000409769 HSBP1O75506 76 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 HTN3P15516 51 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 FCER1GP30273 86 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 COTL1Q14019 142 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 ORMDL2Q53FV1 153 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 TMEM97Q5BJF2 176 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 PDZD11Q5EBL8 140 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 RNASEKQ6P5S7 137 aaKnown RBP2.66□□□□□ -1.98
CLK1-203ENST00000409769 LYPD5Q6UWN5 251 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 FAM19A2Q8N3H0 131 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 C15orf53Q8NAA6 179 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 C20orf203Q8NBC4 194 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 ATP6V0E2Q8NHE4 81 aa2.66□□□□□ -1.98
CLK1-203ENST00000409769 LYSTQ99698 3801 aa2.65□□□□□ -1.98
CLK1-203ENST00000409769 TRBV6-8A0A0A6YYG3 113 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 NUPR2A6NF83 97 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 IGIPA6NJ69 53 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 F8WDY8 70 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 HBDP02042 147 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 S100A6P06703 90 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 HNRNPA3P51991 378 aaKnown RBP2.65□□□□□ -1.99
CLK1-203ENST00000409769 PMCHL1Q16048 86 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 LELP1Q5T871 98 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 CEMP1Q6PRD7 247 aaPredicted RBP2.65□□□□□ -1.99
CLK1-203ENST00000409769 DEFB104AQ8WTQ1 72 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 TOMM6Q96B49 74 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 HIST1H2BLQ99880 126 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 APLNQ9ULZ1 77 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 UBE2D4Q9Y2X8 147 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 DNAH1Q9P2D7 4330 aa2.65□□□□□ -1.99
CLK1-203ENST00000409769 TRBV25-1A0A075B6N4 114 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.64□□□□□ -1.99
CLK1-203ENST00000409769 A0A0J9YXY3 114 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 LOC105371267A0A1B0GV96 52 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 IGKV2-29A2NJV5 120 aaPredicted RBP2.64□□□□□ -1.99
CLK1-203ENST00000409769 LINC01549A6NIU2 74 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 IGLL5B9A064 214 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 LEPROTL1O95214 131 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 G0S2P27469 103 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 TCTAP57738 103 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 RPL39P62891 51 aaKnown RBP2.64□□□□□ -1.99
CLK1-203ENST00000409769 ESRGQ1W209 222 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 LINC00173Q6ZV60 143 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 MRPL52Q86TS9 123 aaKnown RBP2.64□□□□□ -1.99
CLK1-203ENST00000409769 TIMM17AQ99595 171 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 UPK3BQ9BT76 320 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 TMEM243Q9BU79 118 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 TIMM21Q9BVV7 248 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 CYSLTR1Q9Y271 337 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 LINC00588Q9Y4M8 146 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms